RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	INTS10	Q9NVR2	710 aa	Known RBP	13.49	□□□□□ -0.25
APTX-231	ENST00000494973	SLC2A6	Q9UGQ3	507 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	GGT7	Q9UJ14	662 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	CRLS1	Q9UJA2	301 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.49	□□□□□ -0.25
APTX-231	ENST00000494973	KCTD3	Q9Y597	815 aa		13.49	□□□□□ -0.25
APTX-231	ENST00000494973	PLXNA2	O75051	1894 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	TRPM6	Q9BX84	2022 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	CCDC78	A2IDD5	438 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	CCDC162P	A2VCL2	907 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	IGLON5	A6NGN9	336 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	FAM47DP	A6NHR8	397 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	GOLGA8CP	A6NN73	597 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	CFAP99	D6REC4	459 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	CD3EAP	O15446	510 aa	Known RBP	13.48	□□□□□ -0.25
APTX-231	ENST00000494973	LAT	O43561	262 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	BUD23	O43709	281 aa	Known RBP	13.48	□□□□□ -0.25
APTX-231	ENST00000494973	RALB	P11234	206 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	CNTF	P26441	200 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	AKT2	P31751	481 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	ACSL1	P33121	698 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	ETV3	P41162	512 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	ITIH4	Q14624	930 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	LRRC14	Q15048	493 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	ZRANB3	Q5FWF4	1079 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	LGSN	Q5TDP6	509 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	ZNF470	Q6ECI4	717 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	CES3	Q6UWW8	571 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	LRIG3	Q6UXM1	1119 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	FAM151B	Q6UXP7	276 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973		Q6ZVL8	140 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	PHYKPL	Q8IUZ5	450 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	CTAGE3P	Q8IX95	158 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	TMEM105	Q8N8V8	129 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	ZNF398	Q8TD17	642 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	ANKRD7	Q92527	254 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	EID2B	Q96D98	161 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	LENG8	Q96PV6	779 aa	Predicted RBP	13.48	□□□□□ -0.25
APTX-231	ENST00000494973	CPNE1	Q99829	537 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	SLC17A9	Q9BYT1	436 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.48	□□□□□ -0.25
APTX-231	ENST00000494973	ASB8	Q9H765	288 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.48	□□□□□ -0.25
APTX-231	ENST00000494973	C2orf42	Q9NWW7	574 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	VPS18	Q9P253	973 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	SLC24A2	Q9UI40	661 aa		13.48	□□□□□ -0.25
APTX-231	ENST00000494973	PRR23A	A6NEV1	266 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	GOLGA6L10	A6NI86	522 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	AGAP14	A8MT82	685 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	QSOX1	O00391	747 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	MAP3K13	O43283	966 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	TCEA3	O75764	348 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	INHBA	P08476	426 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	HNRNPA2B1	P22626	353 aa	Known RBP	13.47	□□□□□ -0.25
APTX-231	ENST00000494973	ARNT	P27540	789 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	FOXN2	P32314	431 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	GP5	P40197	560 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	DPP6	P42658	865 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	GPR1	P46091	355 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	SERPINB9	P50453	376 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	ARSD	P51689	593 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	CSE1L	P55060	971 aa	Known RBP	13.47	□□□□□ -0.25
APTX-231	ENST00000494973	XIAP	P98170	497 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	SEMG2	Q02383	582 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	PEX6	Q13608	980 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	CASP8	Q14790	479 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	RASA2	Q15283	850 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	TYSND1	Q2T9J0	566 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	HSP90AA5P	Q58FG0	334 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	LDLRAP1	Q5SW96	308 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	RAET1G	Q6H3X3	334 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.47	□□□□□ -0.25
APTX-231	ENST00000494973	CILP2	Q8IUL8	1156 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	GPR26	Q8NDV2	337 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	RIOK2	Q9BVS4	552 aa	Known RBP	13.47	□□□□□ -0.25
APTX-231	ENST00000494973	ABCG8	Q9H221	673 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	IARS2	Q9NSE4	1012 aa	Known RBP	13.47	□□□□□ -0.25
APTX-231	ENST00000494973	RABGEF1	Q9UJ41	708 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	ZNF180	Q9UJW8	692 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	COMMD10	Q9Y6G5	202 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	ZDBF2	Q9HCK1	2354 aa		13.47	□□□□□ -0.25
APTX-231	ENST00000494973	TRBV5-4	A0A0C4DH59	114 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	PRR33	A8MZF0	331 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	C10orf142	B7Z368	130 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	GPR89A	B7ZAQ6	455 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	PRAMEF26	H0Y7S4	382 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973		H3BMM5	538 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	FPGT	O14772	594 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	ATP8B1	O43520	1251 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	CDH16	O75309	829 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	NDUFS3	O75489	264 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	GPR89B	P0CG08	455 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	ERVK-10	P10266	1014 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	ZNF7	P17097	686 aa	Predicted RBP	13.46	□□□□□ -0.25
APTX-231	ENST00000494973	KEL	P23276	732 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	AVPR2	P30518	371 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	MSH2	P43246	934 aa		13.46	□□□□□ -0.25
APTX-231	ENST00000494973	RPL6	Q02878	288 aa	Known RBP	13.46	□□□□□ -0.25
APTX-231	ENST00000494973	CSTF1	Q05048	431 aa	Known RBP	13.46	□□□□□ -0.25
APTX-231	ENST00000494973	PTPRR	Q15256	657 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms