RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 PRRT3Q5FWE3 981 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 PAPD7Q5XG87 772 aaKnown RBP16.15■□□□□ 0.18
YIF1A-209ENST00000494836 DENND5AQ6IQ26 1287 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 C4orf22Q6V702 233 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 NYAP1Q6ZVC0 841 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 LINC00523Q86TU6 105 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 LMX1AQ8TE12 382 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 OR1E3Q8WZA6 343 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 HIC2Q96JB3 615 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 TBATAQ96M53 351 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 PLEKHG4BQ96PX9 1271 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 ZSCAN5AQ9BUG6 496 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 LRRC61Q9BV99 259 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 SPATA16Q9BXB7 569 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 BPIFA1Q9NP55 256 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 FTSJ1Q9UET6 329 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 MOSPD1Q9UJG1 213 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 PKP3Q9Y446 797 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 DGKBQ9Y6T7 804 aa16.15■□□□□ 0.18
YIF1A-209ENST00000494836 PRSS38A1L453 326 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 C2orf81A6NN90 581 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 FADS2P1A8MWK0 482 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 SCAMP1O15126 338 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 INPP4BO15327 924 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 PPFIA2O75334 1257 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 CRTAMO95727 393 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 TNFP01375 233 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 ALPPL2P10696 532 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 CTSEP14091 401 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 SIM1P81133 766 aaPredicted RBP16.14■□□□□ 0.17
YIF1A-209ENST00000494836 TAF1AQ15573 450 aaPredicted RBP16.14■□□□□ 0.17
YIF1A-209ENST00000494836 CYP1B1Q16678 543 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 ZDHHC20Q5W0Z9 365 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 KCTD16Q68DU8 428 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 PDPK2PQ6A1A2 396 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 TTC27Q6P3X3 843 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 DOK6Q6PKX4 331 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 TRIM74Q86UV6 250 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 FSTL5Q8N475 847 aaPredicted RBP16.14■□□□□ 0.17
YIF1A-209ENST00000494836 TRAM1L1Q8N609 369 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 OR4C6Q8NH72 309 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 BRSK1Q8TDC3 778 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 FRMD8Q9BZ67 464 aaPredicted RBP16.14■□□□□ 0.17
YIF1A-209ENST00000494836 CYP4F12Q9HCS2 524 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 MRPL40Q9NQ50 206 aaKnown RBP16.14■□□□□ 0.17
YIF1A-209ENST00000494836 IL17CQ9P0M4 197 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 SAR1BQ9Y6B6 198 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 CSNK1G3Q9Y6M4 447 aa16.14■□□□□ 0.17
YIF1A-209ENST00000494836 COL5A1P20908 1838 aaPredicted RBP16.14■□□□□ 0.17
YIF1A-209ENST00000494836 PCNX2A6NKB5 2137 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 SPAARA0A1B0GVQ0 90 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 STX7O15400 261 aaKnown RBP16.13■□□□□ 0.17
YIF1A-209ENST00000494836 BUD23O43709 281 aaKnown RBP16.13■□□□□ 0.17
YIF1A-209ENST00000494836 PHF2O75151 1096 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 CEACAM5P06731 702 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 APRTP07741 180 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 LPOP22079 712 aaPredicted RBP16.13■□□□□ 0.17
YIF1A-209ENST00000494836 COILP38432 576 aaPredicted RBP16.13■□□□□ 0.17
YIF1A-209ENST00000494836 SPAM1P38567 509 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 BASP1P80723 227 aaKnown RBP16.13■□□□□ 0.17
YIF1A-209ENST00000494836 PDE1BQ01064 536 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 C1orf61Q13536 156 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 ELOCQ15369 112 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 CCDC137Q6PK04 289 aaKnown RBP16.13■□□□□ 0.17
YIF1A-209ENST00000494836 ERMP1Q7Z2K6 904 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 COX14Q96I36 57 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 CNDP2Q96KP4 475 aaKnown RBP16.13■□□□□ 0.17
YIF1A-209ENST00000494836 CAPZA3Q96KX2 299 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 DUSP23Q9BVJ7 150 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 CARS2Q9HA77 564 aaKnown RBP16.13■□□□□ 0.17
YIF1A-209ENST00000494836 NLGN3Q9NZ94 848 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.13■□□□□ 0.179e-6■□□□□ 10.7
YIF1A-209ENST00000494836 SLC17A4Q9Y2C5 497 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 ARL5AQ9Y689 179 aa16.13■□□□□ 0.17
YIF1A-209ENST00000494836 LMO7DNF2Z398 122 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 TRIM38O00635 465 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 TNFSF14O43557 240 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 SIGLEC6O43699 453 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 SUN1O94901 812 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 LDOC1O95751 146 aaPredicted RBP16.12■□□□□ 0.17
YIF1A-209ENST00000494836 POLD2P49005 469 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 FNTAP49354 379 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 CDH17Q12864 832 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 MSLNQ13421 630 aaPredicted RBP16.12■□□□□ 0.17
YIF1A-209ENST00000494836 TCEA2Q15560 299 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 PPP1R21Q6ZMI0 780 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 GLRX5Q86SX6 157 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 DNAAF3Q8N9W5 541 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 CLPBQ9H078 707 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 SUDS3Q9H7L9 328 aaPredicted RBP16.12■□□□□ 0.17
YIF1A-209ENST00000494836 IL26Q9NPH9 171 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 EIF2B3Q9NR50 452 aaKnown RBP16.12■□□□□ 0.17
YIF1A-209ENST00000494836 PIH1D1Q9NWS0 290 aaKnown RBP16.12■□□□□ 0.17
YIF1A-209ENST00000494836 CNOT6Q9ULM6 557 aaKnown RBP16.12■□□□□ 0.17
YIF1A-209ENST00000494836 TMEM98Q9Y2Y6 226 aa16.12■□□□□ 0.17
YIF1A-209ENST00000494836 GLYATL1P3A0A0U1RQE8 302 aa16.11■□□□□ 0.17
YIF1A-209ENST00000494836 TPP1O14773 563 aa16.11■□□□□ 0.17
YIF1A-209ENST00000494836 FANCGO15287 622 aa16.11■□□□□ 0.17
YIF1A-209ENST00000494836 ASMTLO95671 621 aa16.11■□□□□ 0.17
YIF1A-209ENST00000494836 GAS8O95995 478 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms