RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 EXD1Q8NHP7 514 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 FATE1Q969F0 183 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 HDAC11Q96DB2 347 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 CCDC97Q96F63 343 aaPredicted RBP9.55□□□□□ -0.88
MSH5-218ENST00000494646 ZNF830Q96NB3 372 aaPredicted RBP9.55□□□□□ -0.88
MSH5-218ENST00000494646 MLPHQ9BV36 600 aaPredicted RBP9.55□□□□□ -0.88
MSH5-218ENST00000494646 STRADBQ9C0K7 418 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 SEMA6CQ9H3T2 930 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 RDH14Q9HBH5 336 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 TRNAU1APQ9NX07 287 aaKnown RBP9.55□□□□□ -0.88
MSH5-218ENST00000494646 SAE1Q9UBE0 346 aaPredicted RBP9.55□□□□□ -0.88
MSH5-218ENST00000494646 AMACRQ9UHK6 382 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 ZNHIT2Q9UHR6 403 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 LCMT1Q9UIC8 334 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 SLC17A4Q9Y2C5 497 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 PCDHGA8Q9Y5G5 932 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 PCYT1BQ9Y5K3 369 aaPredicted RBP9.55□□□□□ -0.88
MSH5-218ENST00000494646 KALRNO60229 2985 aa9.55□□□□□ -0.88
MSH5-218ENST00000494646 FASNP49327 2511 aaKnown RBP9.54□□□□□ -0.88
MSH5-218ENST00000494646 C1orf232A0A0U1RR37 186 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 CAPN8A6NHC0 703 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 CDRT15L2A8MXV6 281 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 D6RAR5 112 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 TMX2-CTNND1H3BSU7 103 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 PPM1DO15297 605 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 KRT1P04264 644 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 ATP1A1P05023 1023 aaKnown RBP9.54□□□□□ -0.88
MSH5-218ENST00000494646 IVLP07476 585 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 PIRTP0C851 137 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 PNLIPP16233 465 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 ZNF30P17039 623 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 ITIH1P19827 911 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 COMTP21964 271 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 CA4P22748 312 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 MPSTP25325 297 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 TEAD1P28347 426 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 ACTR1BP42025 376 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 SPINT3P49223 89 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 MAPK10P53779 464 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 ACTR1AP61163 376 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 TBX2Q13207 712 aaPredicted RBP9.54□□□□□ -0.88
MSH5-218ENST00000494646 PCSK7Q16549 785 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 ZNF648Q5T619 568 aaPredicted RBP9.54□□□□□ -0.88
MSH5-218ENST00000494646 PHF19Q5T6S3 580 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 NKAIN2Q5VXU1 208 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 SLC9A4Q6AI14 798 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 ADAMTSL4Q6UY14 1074 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 CHST15Q7LFX5 561 aaPredicted RBP9.54□□□□□ -0.88
MSH5-218ENST00000494646 SPRED1Q7Z699 444 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 NT5DC3Q86UY8 548 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 NLRP8Q86W28 1048 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 RHOT1Q8IXI2 618 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 NRSN1Q8IZ57 195 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 NAGSQ8N159 534 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 SPATA22Q8NHS9 363 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 KIAA1524Q8TCG1 905 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 CCHCR1Q8TD31 782 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 TMEM74Q96NL1 305 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 WDR24Q96S15 920 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 DPH1Q9BZG8 443 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 TRIM5Q9C035 493 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 GOLPH3Q9H4A6 298 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 FAM83DQ9H4H8 585 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 ARFGAP3Q9NP61 516 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 HAUS2Q9NVX0 235 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 UBP1Q9NZI7 540 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.54□□□□□ -0.88
MSH5-218ENST00000494646 PISDQ9UG56 409 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 CNOT6Q9ULM6 557 aaKnown RBP9.54□□□□□ -0.88
MSH5-218ENST00000494646 SHOC2Q9UQ13 582 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 ALG6Q9Y672 507 aa9.54□□□□□ -0.88
MSH5-218ENST00000494646 OAS3Q9Y6K5 1087 aaKnown RBP9.54□□□□□ -0.88
MSH5-218ENST00000494646 FADS2P1A8MWK0 482 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 PLD2O14939 933 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 SPOPO43791 374 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 NUDT21O43809 227 aaKnown RBP9.53□□□□□ -0.88
MSH5-218ENST00000494646 MTA2O94776 668 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 EML2O95834 649 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 MT-CYBP00156 380 aaPredicted RBP9.53□□□□□ -0.88
MSH5-218ENST00000494646 SLC4A1P02730 911 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 JMJD7P0C870 316 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 SLC5A2P31639 672 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 ETV5P41161 510 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 SLC1A1P43005 524 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 PPM1FP49593 454 aaPredicted RBP9.53□□□□□ -0.88
MSH5-218ENST00000494646 IFI35P80217 286 aaPredicted RBP9.53□□□□□ -0.88
MSH5-218ENST00000494646 ZFP36L1Q07352 338 aaKnown RBP9.53□□□□□ -0.88
MSH5-218ENST00000494646 PDK1Q15118 436 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 TGIF1Q15583 401 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 PYCR3Q53H96 274 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 IGF2-ASQ6U949 168 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 ZNF574Q6ZN55 896 aaPredicted RBP9.53□□□□□ -0.88
MSH5-218ENST00000494646 ZNF765Q7L2R6 523 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 LYSMD3Q7Z3D4 306 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 PIM3Q86V86 326 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 C17orf82Q86X59 251 aaPredicted RBP9.53□□□□□ -0.88
MSH5-218ENST00000494646 ZNF761Q86XN6 746 aaPredicted RBP9.53□□□□□ -0.88
MSH5-218ENST00000494646 GALNT13Q8IUC8 556 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 CNGA4Q8IV77 575 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 RCBTB1Q8NDN9 531 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms