RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 C10orf88Q9H8K7 445 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 RAD18Q9NS91 495 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 TRNAU1APQ9NX07 287 aaKnown RBP22.51■■□□□ 1.19
SNIP1-203ENST00000493916 PADI4Q9UM07 663 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 CLCA2Q9UQC9 943 aa22.51■■□□□ 1.19
SNIP1-203ENST00000493916 CPED1A4D0V7 1026 aa22.5■■□□□ 1.19
SNIP1-203ENST00000493916 GOLGA6L9A6NEM1 432 aa22.5■■□□□ 1.19
SNIP1-203ENST00000493916 PIRTP0C851 137 aa22.5■■□□□ 1.19
SNIP1-203ENST00000493916 TARDBPQ13148 414 aaKnown RBP eCLIP22.5■■□□□ 1.19
SNIP1-203ENST00000493916 KLF1Q13351 362 aaPredicted RBP22.5■■□□□ 1.19
SNIP1-203ENST00000493916 ITPRIPL1Q6GPH6 555 aa22.5■■□□□ 1.19
SNIP1-203ENST00000493916 LRRC8AQ8IWT6 810 aa22.5■■□□□ 1.19
SNIP1-203ENST00000493916 TTC13Q8NBP0 860 aa22.5■■□□□ 1.19
SNIP1-203ENST00000493916 MAPK15Q8TD08 544 aa22.5■■□□□ 1.19
SNIP1-203ENST00000493916 PTCD2Q8WV60 388 aaKnown RBP22.5■■□□□ 1.19
SNIP1-203ENST00000493916 SIRPGQ9P1W8 387 aa22.5■■□□□ 1.19
SNIP1-203ENST00000493916 GUCA1BQ9UMX6 200 aa22.5■■□□□ 1.19
SNIP1-203ENST00000493916 SHOC2Q9UQ13 582 aa22.5■■□□□ 1.19
SNIP1-203ENST00000493916 ZZEF1O43149 2961 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 STK10O94804 968 aaKnown RBP22.49■■□□□ 1.19
SNIP1-203ENST00000493916 MT-CO3P00414 261 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 TNNT3P45378 269 aaPredicted RBP22.49■■□□□ 1.19
SNIP1-203ENST00000493916 GNPDA1P46926 289 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 POLD2P49005 469 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 ILF3Q12906 894 aaKnown RBP eCLIP22.49■■□□□ 1.19
SNIP1-203ENST00000493916 SIRPB2Q5JXA9 342 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 DARS2Q6PI48 645 aaKnown RBP22.49■■□□□ 1.19
SNIP1-203ENST00000493916 OGFOD3Q6PK18 319 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 DOK6Q6PKX4 331 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 ZNF662Q6ZS27 426 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 GPR156Q8NFN8 814 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 CCL4L1Q8NHW4 92 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 FAM118BQ9BPY3 351 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 GSDMCQ9BYG8 508 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 GPR63Q9BZJ6 419 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 ABCG4Q9H172 646 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 TRABDQ9H4I3 376 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 VPS18Q9P253 973 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 GULP1Q9UBP9 304 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 DKK4Q9UBT3 224 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 ZMIZ1Q9ULJ6 1067 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 CNOT6Q9ULM6 557 aaKnown RBP22.49■■□□□ 1.19
SNIP1-203ENST00000493916 SPO11Q9Y5K1 396 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 DMXL2Q8TDJ6 3036 aa22.49■■□□□ 1.19
SNIP1-203ENST00000493916 TRABD2BA6NFA1 517 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 FADS2P1A8MWK0 482 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 F5H423 210 aaPredicted RBP22.48■■□□□ 1.19
SNIP1-203ENST00000493916 INPP4BO15327 924 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 KCNN4O15554 427 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 PTMAP06454 111 aaKnown RBP22.48■■□□□ 1.19
SNIP1-203ENST00000493916 HLA-DPA1P20036 260 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 SLC1A5Q15758 541 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 ANKRD20A2Q5SQ80 823 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 PERM1Q5SV97 790 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 ANKRD20A1Q5TYW2 823 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 ANKRD20A3Q5VUR7 823 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 TRIM74Q86UV6 250 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 NRROSQ86YC3 692 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 FAM46DQ8NEK8 389 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 IPMKQ8NFU5 416 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 OR6C4Q8NGE1 309 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 GORASP1Q9BQQ3 440 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 CCDC86Q9H6F5 360 aaKnown RBP22.48■■□□□ 1.19
SNIP1-203ENST00000493916 TMEM98Q9Y2Y6 226 aa22.48■■□□□ 1.19
SNIP1-203ENST00000493916 NOBOXO60393 691 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 ANXA9O76027 345 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 SLC4A1P02730 911 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 CCDC175P0C221 793 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 ADCY8P40145 1251 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 GEMP55040 296 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 CCZ1BP86790 482 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 CCZ1P86791 482 aaPredicted RBP22.47■■□□□ 1.19
SNIP1-203ENST00000493916 PDPK2PQ6A1A2 396 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 GPR26Q8NDV2 337 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 WDR48Q8TAF3 677 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 SPATA13Q96N96 652 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 DEPDC7Q96QD5 511 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 OR2M4Q96R27 311 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 ZSCAN5AQ9BUG6 496 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 FSD1LQ9BXM9 530 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 SUDS3Q9H7L9 328 aaPredicted RBP22.47■■□□□ 1.19
SNIP1-203ENST00000493916 HACD3Q9P035 362 aa22.47■■□□□ 1.19
SNIP1-203ENST00000493916 AURKAO14965 403 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 FGF1P05230 155 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 HMGCLP35914 325 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 CHRNA4P43681 627 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 PEX6Q13608 980 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 PYCR3Q53H96 274 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 TRAM1L1Q8N609 369 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 NXPE2Q96DL1 559 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 PPP1R2P1Q96PQ5 205 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 PLEKHG4BQ96PX9 1271 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 CCDC3Q9BQI4 270 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 NRSN2Q9GZP1 204 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 AAR2Q9Y312 384 aaKnown RBP22.46■■□□□ 1.19
SNIP1-203ENST00000493916 OAS3Q9Y6K5 1087 aaKnown RBP22.46■■□□□ 1.19
SNIP1-203ENST00000493916 BPTFQ12830 3046 aa22.46■■□□□ 1.19
SNIP1-203ENST00000493916 COL27A1Q8IZC6 1860 aaPredicted RBP22.45■■□□□ 1.19
SNIP1-203ENST00000493916 SCN8AQ9UQD0 1980 aa22.45■■□□□ 1.18
SNIP1-203ENST00000493916 GOLGA4Q13439 2230 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms