RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 PAK4O96013 591 aaPredicted RBP19.28■□□□□ 0.68
USP39-218ENST00000493829 UGT1A6P19224 532 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 UGT1A1P22309 533 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 UGT1A4P22310 534 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 OXTRP30559 389 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 FOXN2P32314 431 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 UGT1A3P35503 534 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 UGT1A5P35504 534 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 SLC1A2P43004 574 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 ABCG1P45844 678 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 CTBP1Q13363 440 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 RAET1GQ6H3X3 334 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 NEPROQ6NW34 567 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 MAML2Q8IZL2 1156 aaPredicted RBP19.28■□□□□ 0.68
USP39-218ENST00000493829 SNX19Q92543 992 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 SPACA7Q96KW9 195 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 PLEKHG4BQ96PX9 1271 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 FAM167BQ9BTA0 163 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 ASB8Q9H765 288 aa19.28■□□□□ 0.68
USP39-218ENST00000493829 MBD1Q9UIS9 605 aaPredicted RBP19.28■□□□□ 0.68
USP39-218ENST00000493829 FAM159BA6NKW6 160 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 H7C0S8 307 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 DYNC1I1O14576 645 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 CD3EAPO15446 510 aaKnown RBP19.27■□□□□ 0.68
USP39-218ENST00000493829 NDUFS2O75306 463 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 C1QAP02745 245 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 ITGALP20701 1170 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 PSMA3P25788 255 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 DCDC1P59894 354 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 MPP1Q00013 466 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 IFFO1Q0D2I5 559 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 IRF4Q15306 451 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 ATP13A5Q4VNC0 1218 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 FASTKD1Q53R41 847 aaKnown RBP19.27■□□□□ 0.68
USP39-218ENST00000493829 HENMT1Q5T8I9 393 aaKnown RBP19.27■□□□□ 0.68
USP39-218ENST00000493829 MAMSTRQ6ZN01 415 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 CYP2U1Q7Z449 544 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 PIANPQ8IYJ0 282 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 PLA2G15Q8NCC3 412 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 SLC17A9Q9BYT1 436 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 KDM4CQ9H3R0 1056 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 RAD18Q9NS91 495 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 CRLS1Q9UJA2 301 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 APPL1Q9UKG1 709 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 PSAT1Q9Y617 370 aa19.27■□□□□ 0.68
USP39-218ENST00000493829 TRPM6Q9BX84 2022 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 FADS2P1A8MWK0 482 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 RAD51BO15315 384 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 INPP4BO15327 924 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 TDGF1P13385 188 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 BCKDHBP21953 392 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 SLCO1A2P46721 670 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 CACNG1Q06432 222 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 NFATC2Q13469 925 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 WSCD2Q2TBF2 565 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 USP39Q53GS9 565 aaKnown RBP19.27■□□□□ 0.67
USP39-218ENST00000493829 SETMARQ53H47 684 aaPredicted RBP19.27■□□□□ 0.67
USP39-218ENST00000493829 SPDYCQ5MJ68 293 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 ZDHHC20Q5W0Z9 365 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 TRIM69Q86WT6 500 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 NRSN1Q8IZ57 195 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 EPS8L3Q8TE67 593 aaKnown RBP19.27■□□□□ 0.67
USP39-218ENST00000493829 CDKL2Q92772 493 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 CYTH2Q99418 400 aa19.27■□□□□ 0.67
USP39-218ENST00000493829 MBNL1Q9NR56 388 aaKnown RBP19.27■□□□□ 0.67
USP39-218ENST00000493829 FBXO6Q9NRD1 293 aaPredicted RBP19.27■□□□□ 0.67
USP39-218ENST00000493829 DOCK9Q9BZ29 2069 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 ZDBF2Q9HCK1 2354 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 RGSL1A5PLK6 1076 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 FAM155BO75949 473 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 RPL6Q02878 288 aaKnown RBP19.26■□□□□ 0.67
USP39-218ENST00000493829 SRSF5Q13243 272 aaKnown RBP19.26■□□□□ 0.67
USP39-218ENST00000493829 FRG1Q14331 258 aaKnown RBP19.26■□□□□ 0.67
USP39-218ENST00000493829 KLHL38Q2WGJ6 581 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 TEDDM1Q5T9Z0 273 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 KIAA0895LQ68EN5 471 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 NEK5Q6P3R8 708 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 SNX20Q7Z614 316 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 ZNF398Q8TD17 642 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 ATXN7L3BQ96GX2 97 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 ZIM3Q96PE6 472 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 C1QTNF2Q9BXJ5 285 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 C11orf16Q9NQ32 467 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 CA5BQ9Y2D0 317 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 KMT2EQ8IZD2 1858 aa19.26■□□□□ 0.67
USP39-218ENST00000493829 MAP3K13O43283 966 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 IGHV4-34P06331 123 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 AVPR2P30518 371 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 GPR1P46091 355 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 LRRC14Q15048 493 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 MRNIPQ6NTE8 343 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 BMP8AQ7Z5Y6 402 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 TRAM1L1Q8N609 369 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 TP53I13Q8NBR0 393 aaPredicted RBP19.25■□□□□ 0.67
USP39-218ENST00000493829 GDAP1Q8TB36 358 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 NAT14Q8WUY8 206 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 BIRC7Q96CA5 298 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 CCDC97Q96F63 343 aaPredicted RBP19.25■□□□□ 0.67
USP39-218ENST00000493829 PAFAH2Q99487 392 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 ZSCAN5AQ9BUG6 496 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms