RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 OR13C4Q8NGS5 318 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 GSDMBQ8TAX9 411 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 HEXDCQ8WVB3 486 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 CAVIN3Q969G5 261 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 ZNF669Q96BR6 464 aaPredicted RBP12.38□□□□□ -0.43
SNX17-208ENST00000493711 AP2M1Q96CW1 435 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 EID2BQ96D98 161 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 CFAP36Q96G28 342 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 CDKN2AIPNLQ96HQ2 116 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 DNAJC1Q96KC8 554 aaKnown RBP12.38□□□□□ -0.43
SNX17-208ENST00000493711 FAM167BQ9BTA0 163 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 ABCG8Q9H221 673 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 C6orf106Q9H6K1 298 aaPredicted RBP12.38□□□□□ -0.43
SNX17-208ENST00000493711 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.38□□□□□ -0.43
SNX17-208ENST00000493711 KCTD3Q9Y597 815 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 HS3ST3A1Q9Y663 406 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 SHROOM3Q8TF72 1996 aa12.38□□□□□ -0.43
SNX17-208ENST00000493711 ZCWPW2A0A1B0GU75 182 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 FPGTO14772 594 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 BUD23O43709 281 aaKnown RBP12.37□□□□□ -0.43
SNX17-208ENST00000493711 VAPBO95292 243 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 CD27P26842 260 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 NMBRP28336 390 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 SEMG2Q02383 582 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 CACNG1Q06432 222 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 DMWDQ09019 674 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 TCF15Q12870 199 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 THOC5Q13769 683 aaKnown RBP12.37□□□□□ -0.43
SNX17-208ENST00000493711 HENMT1Q5T8I9 393 aaKnown RBP12.37□□□□□ -0.43
SNX17-208ENST00000493711 SEL1L3Q68CR1 1132 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 ESRP1Q6NXG1 681 aaKnown RBP12.37□□□□□ -0.43
SNX17-208ENST00000493711 CERS6Q6ZMG9 384 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 UNC5AQ6ZN44 842 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 C3orf62Q6ZUJ4 267 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 CEP68Q76N32 757 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 SNX20Q7Z614 316 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 IGDCC3Q8IVU1 814 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 AGGF1Q8N302 714 aaeCLIP12.37□□□□□ -0.43
SNX17-208ENST00000493711 FAM160A2Q8N612 972 aaPredicted RBP12.37□□□□□ -0.43
SNX17-208ENST00000493711 GPR26Q8NDV2 337 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 OR13J1Q8NGT2 312 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 OR6P1Q8NGX9 317 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 OR4L1Q8NH43 312 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 AENQ8WTP8 325 aaKnown RBP12.37□□□□□ -0.43
SNX17-208ENST00000493711 HNRNPLLQ8WVV9 542 aaKnown RBP12.37□□□□□ -0.43
SNX17-208ENST00000493711 CDKL2Q92772 493 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 HDAC10Q969S8 669 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 MFSD3Q96ES6 412 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 TBATAQ96M53 351 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 TCF12Q99081 682 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 RIOK2Q9BVS4 552 aaKnown RBP12.37□□□□□ -0.43
SNX17-208ENST00000493711 SPATA16Q9BXB7 569 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 VPS37BQ9H9H4 285 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 BPIFA1Q9NP55 256 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 IL26Q9NPH9 171 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 C20orf96Q9NUD7 363 aaPredicted RBP12.37□□□□□ -0.43
SNX17-208ENST00000493711 SMOXQ9NWM0 555 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 NSMCE4AQ9NXX6 385 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 PLA2G2EQ9NZK7 142 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 FKBPLQ9UIM3 349 aa12.37□□□□□ -0.43
SNX17-208ENST00000493711 MBD1Q9UIS9 605 aaPredicted RBP12.37□□□□□ -0.43
SNX17-208ENST00000493711 ZFHX2Q9C0A1 2572 aaPredicted RBP12.37□□□□□ -0.43
SNX17-208ENST00000493711 A0A1W2PPC4 97 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 MEI4A8MW99 385 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 F8W8V4 182 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 BANF1O75531 89 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 SRP72O76094 671 aaKnown RBP12.36□□□□□ -0.43
SNX17-208ENST00000493711 PRAMEF1O95521 474 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 PAK4O96013 591 aaPredicted RBP12.36□□□□□ -0.43
SNX17-208ENST00000493711 IGHV4-34P06331 123 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 ABHD2P08910 425 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 HOXC4P09017 264 aaPredicted RBP12.36□□□□□ -0.43
SNX17-208ENST00000493711 FAM153BP0C7A2 387 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 MYBL2P10244 700 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 GM2AP17900 193 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 MC4RP32245 332 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 ARCN1P48444 511 aaKnown RBP12.36□□□□□ -0.43
SNX17-208ENST00000493711 PPP2CBP62714 309 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 PPP2CAP67775 309 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 XIAPP98170 497 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 MGAT5Q09328 741 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 OVGP1Q12889 678 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 NFATC2Q13469 925 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 NAB1Q13506 487 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 FASTKD3Q14CZ7 662 aaKnown RBP12.36□□□□□ -0.43
SNX17-208ENST00000493711 KYNUQ16719 465 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 WSCD2Q2TBF2 565 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 FAM153CQ494X1 144 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 FASTKD1Q53R41 847 aaKnown RBP12.36□□□□□ -0.43
SNX17-208ENST00000493711 HP1BP3Q5SSJ5 553 aaPredicted RBP12.36□□□□□ -0.43
SNX17-208ENST00000493711 RNF187Q5TA31 235 aaPredicted RBP12.36□□□□□ -0.43
SNX17-208ENST00000493711 NEPROQ6NW34 567 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 PNCKQ6P2M8 343 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 ADAMTSL4Q6UY14 1074 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 RABEPKQ7Z6M1 372 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 DCP2Q8IU60 420 aaKnown RBP12.36□□□□□ -0.43
SNX17-208ENST00000493711 GPR150Q8NGU9 434 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 ZNF398Q8TD17 642 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 SKA1Q96BD8 255 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 CENPTQ96BT3 561 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms