RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 FADS3Q9Y5Q0 445 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 KCNE2Q9Y6J6 123 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 NUMBLQ9Y6R0 609 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 MAU2Q9Y6X3 613 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 ZHX2Q9Y6X8 837 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 NISCHQ9Y2I1 1504 aa4.22□□□□□ -1.73
BRCA1-220ENST00000492859 OR2AG2A6NM03 316 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 LRRC53A6NM62 1247 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 TRPC5OSA6NMA1 111 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 METTL12A8MUP2 240 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 TGFBR3LH3BV60 316 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SLC30A4O14863 429 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CHUKO15111 745 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SEC14L5O43304 696 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 KCNAB3O43448 404 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SPRY1O43609 319 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SMIM24O75264 130 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 JRKO75564 520 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF202O95125 648 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 RAB3DO95716 219 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 TFRCP02786 760 aaKnown RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 MT-ND5P03915 603 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PROCP04070 461 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CAPN1P07384 714 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 STAG3L2P0CL84 134 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 VSIG8P0DPA2 414 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CALCBP10092 127 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CYP2C9P11712 490 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SRCP12931 536 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 ERCC2P18074 760 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CYP3A5P20815 502 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CMA1P23946 247 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CD27P26842 260 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 HNRNPH1P31943 449 aaKnown RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 BSGP35613 385 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SYKP43405 635 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PIK3CGP48736 1102 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 GNAQP50148 359 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 GNG10P50151 68 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SLC16A1P53985 500 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 UCP2P55851 309 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SOX10P56693 466 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 ANTXR2P58335 489 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 BPIFB4P59827 614 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 NKX6-1P78426 367 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SCAPQ12770 1279 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SPP2Q13103 211 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 OLIG2Q13516 323 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PEX6Q13608 980 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 IL10RAQ13651 578 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 GCKRQ14397 625 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 TMEM132BQ14DG7 1078 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PTPRRQ15256 657 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PNLIPRP3Q17RR3 467 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SLC5A12Q1EHB4 618 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 HSDL1Q3SXM5 330 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CT83Q5H943 113 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF484Q5JVG2 852 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 GCNT6Q5T4J0 391 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 TTC33Q6PID6 262 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CLEC9AQ6UXN8 241 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 ETV3LQ6ZN32 361 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 FRA10AC1Q70Z53 315 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 BZW1Q7L1Q6 419 aaKnown RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 COPS6Q7L5N1 327 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 TAS1R1Q7RTX1 841 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PAGE2Q7Z2X7 111 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PRICKLE2Q7Z3G6 844 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF554Q86TJ5 538 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SERINC5Q86VE9 423 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 EXOC3L1Q86VI1 746 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 GAS2L3Q86XJ1 694 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 TBC1D10CQ8IV04 446 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 MISPQ8IVT2 679 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 NPAS3Q8IXF0 933 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 MCOLN2Q8IZK6 566 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 FAM185AQ8N0U4 392 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 IQCKQ8N0W5 287 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CEP112Q8N8E3 955 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PI4KAP1Q8N8J0 262 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 L3MBTL4Q8NA19 623 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 KBTBD3Q8NAB2 608 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CCNYQ8ND76 341 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 EXD1Q8NHP7 514 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 RNASE8Q8TDE3 154 aaKnown RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 C7orf43Q8WVR3 580 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 HTR3CQ8WXA8 447 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 SNX19Q92543 992 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CCDC127Q96BQ5 260 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 RNF31Q96EP0 1072 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 LINC00615Q96LM1 132 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 ZSWIM3Q96MP5 696 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 QRFPRQ96P65 431 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 RBM15Q96T37 977 aaKnown RBP eCLIP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 ELF4Q99607 663 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 DPYSL5Q9BPU6 564 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 PELOQ9BRX2 385 aaKnown RBP4.21□□□□□ -1.74
BRCA1-220ENST00000492859 RTKNQ9BST9 563 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 CNPY3Q9BT09 278 aa4.21□□□□□ -1.74
BRCA1-220ENST00000492859 DERL2Q9GZP9 239 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms