RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 RTP4Q96DX8 246 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 SCARF2Q96GP6 870 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 COX14Q96I36 57 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 PLEKHG4BQ96PX9 1271 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 WDR24Q96S15 920 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 AGAP2Q99490 1192 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 TMEM121Q9BTD3 319 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 SCNM1Q9BWG6 230 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 CLPBQ9H078 707 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 KCNF1Q9H3M0 494 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 CAAP1Q9H8G2 361 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 CYP4F12Q9HCS2 524 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 MRPL40Q9NQ50 206 aaKnown RBP10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 TRNAU1APQ9NX07 287 aaKnown RBP10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 VPS18Q9P253 973 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 FEZ2Q9UHY8 353 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 MOSPD1Q9UJG1 213 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 JRKLQ9Y4A0 524 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 SPO11Q9Y5K1 396 aa10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 ARID1BQ8NFD5 2236 aaPredicted RBP10.6□□□□□ -0.71
CDC42SE1-206ENST00000492796 PTPRBP23467 1997 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 LY6G6EA0A0G2JKS1 128 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 PPFIA2O75334 1257 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 SLC4A1P02730 911 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 CELA2BP08218 269 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 MSNP26038 577 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 ADRA1AP35348 466 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 CHRNA4P43681 627 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 GDF10P55107 478 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 E2F1Q01094 437 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 PEX6Q13608 980 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 OASLQ15646 514 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 SMAD1Q15797 465 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 PARP6Q2NL67 630 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 KCTD16Q68DU8 428 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 RANBP10Q6VN20 620 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 TMPRSS7Q7RTY8 843 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 TTC30BQ8N4P2 665 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 SLC25A41Q8N5S1 370 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 ARL10Q8N8L6 244 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 FAM71DQ8N9W8 422 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 DTX3LQ8TDB6 740 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 BLOC1S5Q8TDH9 187 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 ATG4AQ8WYN0 398 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 FICDQ9BVA6 458 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 SPATA16Q9BXB7 569 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 GSDMCQ9BYG8 508 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 TMEM168Q9H0V1 697 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 LRRC40Q9H9A6 602 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 CARS2Q9HA77 564 aaKnown RBP10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 KLK13Q9UKR3 277 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 SUFUQ9UMX1 484 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 MSRB2Q9Y3D2 182 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 U3KQA8 63 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 SPTBN2O15020 2390 aa10.59□□□□□ -0.71
CDC42SE1-206ENST00000492796 KMT2BQ9UMN6 2715 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 TPRP12270 2363 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 EME2A4GXA9 379 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 FADS2P1A8MWK0 482 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 AURKAO14965 403 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 INPP4BO15327 924 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 PSMD3O43242 534 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 TOP3BO95985 862 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 AGTP01019 485 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 FGGP02679 453 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 BPIP17213 487 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 ACTN2P35609 894 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 SPAM1P38567 509 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 GNPDA1P46926 289 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 PDE1BQ01064 536 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 ILF3Q12906 894 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 LRP8Q14114 963 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 NR0B2Q15466 257 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 SIX1Q15475 284 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 CCNG2Q16589 344 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 CCDC157Q569K6 752 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 ALS2CLQ60I27 953 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 KCTD11Q693B1 232 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 DRICH1Q6PGQ1 229 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 DOK6Q6PKX4 331 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 DHRS13Q6UX07 377 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 NYAP1Q6ZVC0 841 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 TAF8Q7Z7C8 310 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 TMPRSS12Q86WS5 348 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 PHYKPLQ8IUZ5 450 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 REXO1L1PQ8IX06 675 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 SLC35F3Q8IY50 421 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 GPR26Q8NDV2 337 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 IFI44Q8TCB0 444 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 GPBAR1Q8TDU6 330 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 C1orf54Q8WWF1 131 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 NAT6Q93015 286 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 CNTNAP3BQ96NU0 1288 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 VPS35Q96QK1 796 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 OR2M4Q96R27 311 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 C19orf43Q9BQ61 176 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 TBL1YQ9BQ87 522 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 CNTNAP3Q9BZ76 1288 aa10.58□□□□□ -0.72
CDC42SE1-206ENST00000492796 RMI1Q9H9A7 625 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms