RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 WNT9BO14905 357 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 BEST1O76090 585 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 GLUD1P00367 558 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 ACTN1P12814 892 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 UBA1P22314 1058 aaKnown RBP3.97□□□□□ -1.77
CLK1-213ENST00000492793 HOXC9P31274 260 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 ACSL1P33121 698 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 KRT20P35900 424 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 NRIP1P48552 1158 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 GLUD2P49448 558 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 COMPP49747 757 aaPredicted RBP3.97□□□□□ -1.77
CLK1-213ENST00000492793 RAD23BP54727 409 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 MRPS34P82930 218 aaKnown RBP3.97□□□□□ -1.77
CLK1-213ENST00000492793 Q0VFX4 171 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 EPS8Q12929 822 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 KCNT1Q5JUK3 1230 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 DCST1Q5T197 706 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 TMEM198Q66K66 360 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 JADE1Q6IE81 842 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 PLEKHA7Q6IQ23 1121 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 CCDC190Q86UF4 302 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 POC5Q8NA72 575 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 APPL2Q8NEU8 664 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 HMGCLL1Q8TB92 370 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 HM13Q8TCT9 377 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 APBB2Q92870 758 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 C3orf30Q96M34 536 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 KCNN2Q9H2S1 579 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 HRH4Q9H3N8 390 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 SEBOXQ9HB31 216 aaPredicted RBP3.97□□□□□ -1.77
CLK1-213ENST00000492793 SUCLA2Q9P2R7 463 aaPredicted RBP3.97□□□□□ -1.77
CLK1-213ENST00000492793 STK39Q9UEW8 545 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 TINAGQ9UJW2 476 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 FBXW11Q9UKB1 542 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 PCDHA7Q9UN72 937 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 CMAHPQ9Y471 501 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 LOXL2Q9Y4K0 774 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 SNX8Q9Y5X2 465 aa3.97□□□□□ -1.77
CLK1-213ENST00000492793 KANSL1LA0AUZ9 987 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 LRRC72A6NJI9 287 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 EIF4E1BA6NMX2 242 aaKnown RBP3.96□□□□□ -1.78
CLK1-213ENST00000492793 SPINT2O43291 252 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 PLRG1O43660 514 aaKnown RBP3.96□□□□□ -1.78
CLK1-213ENST00000492793 ICAM1P05362 532 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 CENPBP07199 599 aaPredicted RBP3.96□□□□□ -1.78
CLK1-213ENST00000492793 AKR1B1P15121 316 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 LMO1P25800 156 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 PON1P27169 355 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 MATR3P43243 847 aaKnown RBP eCLIP3.96□□□□□ -1.78
CLK1-213ENST00000492793 MSH2P43246 934 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 MAD2L1Q13257 205 aaPredicted RBP3.96□□□□□ -1.78
CLK1-213ENST00000492793 KCNC3Q14003 757 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 KRT33BQ14525 404 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 KCTD2Q14681 263 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 CALCRLQ16602 461 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 PCGF3Q3KNV8 242 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 ATP13A5Q4VNC0 1218 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 ZNF805Q5CZA5 627 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 IGSF11Q5DX21 431 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 ARID3BQ8IVW6 561 aaPredicted RBP3.96□□□□□ -1.78
CLK1-213ENST00000492793 PGBD5Q8N414 524 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 NEXN-AS1Q8NBZ9 246 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 OR1J2Q8NGS2 313 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 GSDMBQ8TAX9 411 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 FAM216AQ8WUB2 273 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 NEUROG1Q92886 237 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 MIB2Q96AX9 1013 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 GRAMD2BQ96HH9 432 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 PPP1R13BQ96KQ4 1090 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 OR2A14Q96R47 310 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 MTERF1Q99551 399 aaKnown RBP3.96□□□□□ -1.78
CLK1-213ENST00000492793 C1QTNF1Q9BXJ1 281 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 DNAJC18Q9H819 358 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 EPB41L5Q9HCM4 733 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 ARHGEF38Q9NXL2 777 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 MRPL15Q9P015 296 aaKnown RBP3.96□□□□□ -1.78
CLK1-213ENST00000492793 KLHL20Q9Y2M5 609 aa3.96□□□□□ -1.78
CLK1-213ENST00000492793 PTRH2Q9Y3E5 179 aaKnown RBP3.96□□□□□ -1.78
CLK1-213ENST00000492793 LACTBL1A8MY62 500 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 ALPLP05186 524 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 SNHG28P0DPA3 235 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 NNMTP40261 264 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 RAD52P43351 418 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 LMAN1P49257 510 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 HTR6P50406 440 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 HNRNPH2P55795 449 aaKnown RBP3.95□□□□□ -1.78
CLK1-213ENST00000492793 RRP1P56182 461 aaKnown RBP3.95□□□□□ -1.78
CLK1-213ENST00000492793 PSMC6P62333 389 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 PPP2R2BQ00005 443 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 CALD1Q05682 793 aaKnown RBP3.95□□□□□ -1.78
CLK1-213ENST00000492793 MYBPHQ13203 477 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 BMP2KLQ5H9B9 411 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 C8orf82Q6P1X6 216 aaPredicted RBP3.95□□□□□ -1.78
CLK1-213ENST00000492793 RHBDF2Q6PJF5 856 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 CFAP77Q6ZQR2 320 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 BRINP3Q76B58 766 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 GPR180Q86V85 440 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 HACE1Q8IYU2 909 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 SCYL3Q8IZE3 742 aa3.95□□□□□ -1.78
CLK1-213ENST00000492793 IQCF1Q8N6M8 205 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms