RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 KAT8Q9H7Z6 458 aaKnown RBP9.68□□□□□ -0.86
VPS8-225ENST00000492449 UCKL1Q9NWZ5 548 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 CCDC59Q9P031 241 aaKnown RBP9.68□□□□□ -0.86
VPS8-225ENST00000492449 STOML2Q9UJZ1 356 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 KCNH4Q9UQ05 1017 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 TLR6Q9Y2C9 796 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 PCDHGB2Q9Y5G2 931 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 CSNK1G3Q9Y6M4 447 aa9.68□□□□□ -0.86
VPS8-225ENST00000492449 A0A096LPK6 155 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TOR1AO14656 332 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 UBDO15205 165 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TBC1D4O60343 1298 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 PSKH1P11801 424 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 JUNDP17535 347 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 ATF4P18848 351 aaPredicted RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 FMO4P31512 558 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 RYKP34925 604 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 MLLT3P42568 568 aaPredicted RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 CCR10P46092 362 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 RHAGQ02094 409 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 FAPQ12884 760 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TRAF3Q13114 568 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 IL18R1Q13478 541 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 MEP1AQ16819 746 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 CYP51A1Q16850 503 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 IMPG1Q17R60 797 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 ZBTB41Q5SVQ8 909 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TPRG1LQ5T0D9 272 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TRAPPC3LQ5T215 181 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 DGLUCYQ7Z3D6 616 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 RETREG3Q86VR2 466 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 RAB43Q86YS6 212 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 SLC16A10Q8TF71 515 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TMCO6Q96DC7 493 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 ZHX1-C8orf76Q96EF9 292 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 MBOAT4Q96T53 435 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 LPIN3Q9BQK8 851 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 ROGDIQ9GZN7 287 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 NIPAL2Q9H841 368 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 NTN4Q9HB63 628 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 IARS2Q9NSE4 1012 aaKnown RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 IGSF5Q9NSI5 407 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 USE1Q9NZ43 259 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TBX20Q9UMR3 447 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 LTBP4Q8N2S1 1624 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 PNMA8CA0A1B0GUJ8 204 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 LINC00854A0A1B0GVQ3 168 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TARM1B6A8C7 271 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 H3BQ06 376 aaPredicted RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 ARHGEF9O43307 516 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 PI15O43692 258 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 KATNA1O75449 491 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 MED26O95402 600 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 METTL18O95568 372 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 CD6P30203 668 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TGFBR2P37173 567 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 EVA1CP58658 441 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 ISL1P61371 349 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TFAMQ00059 246 aaKnown RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 CD47Q08722 323 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 MGAT3Q09327 533 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 PPP1R3AQ16821 1122 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 DALRD3Q5D0E6 543 aaKnown RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 DPY19L3Q6ZPD9 716 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 GPD1LQ8N335 351 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 CCDC24Q8N4L8 307 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 PLD5Q8N7P1 536 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 ARNTL2Q8WYA1 636 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 CCDC120Q96HB5 630 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 C1QTNF1Q9BXJ1 281 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 SMOC2Q9H3U7 446 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TOR3AQ9H497 397 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 IFT22Q9H7X7 185 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 APOBEC3GQ9HC16 384 aaKnown RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 POLR3BQ9NW08 1133 aaPredicted RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 CCDC167Q9P0B6 97 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 ATP6V1HQ9UI12 483 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 TRMT6Q9UJA5 497 aaKnown RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 CPSF3Q9UKF6 684 aaKnown RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 TBC1D24Q9ULP9 559 aa9.67□□□□□ -0.86
VPS8-225ENST00000492449 XIRP1Q702N8 1843 aaKnown RBP9.67□□□□□ -0.86
VPS8-225ENST00000492449 ANGPT2O15123 496 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 VNN1O95497 513 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 ALOX12P18054 663 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 HDCP19113 662 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 CHRM3P20309 590 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 CYP3A5P20815 502 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 CBLP22681 906 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 ALDH4A1P30038 563 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 CSTF2P33240 577 aaKnown RBP eCLIP9.66□□□□□ -0.86
VPS8-225ENST00000492449 ST13P50502 369 aaKnown RBP9.66□□□□□ -0.86
VPS8-225ENST00000492449 IRF9Q00978 393 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 PIGFQ07326 219 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 IKQ13123 557 aaPredicted RBP9.66□□□□□ -0.86
VPS8-225ENST00000492449 AAK1Q2M2I8 961 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 COQ5Q5HYK3 327 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 CES5AQ6NT32 575 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 WDTC1Q8N5D0 677 aa9.66□□□□□ -0.86
VPS8-225ENST00000492449 OR4M2Q8NGB6 313 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms