RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 FAM91A1Q658Y4 838 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 FAM151BQ6UXP7 276 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 RANBP10Q6VN20 620 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 DSELQ8IZU8 1212 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 ZBTB2Q8N680 514 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 DCAF4L2Q8NA75 395 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 ZNF296Q8WUU4 475 aaPredicted RBP7.32□□□□□ -1.24
NPHP3-208ENST00000490993 IGSF8Q969P0 613 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 VPS33AQ96AX1 596 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 ROPN1LQ96C74 230 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 LENG8Q96PV6 779 aaPredicted RBP7.32□□□□□ -1.24
NPHP3-208ENST00000490993 AARSD1Q9BTE6 412 aaKnown RBP7.32□□□□□ -1.24
NPHP3-208ENST00000490993 PARVBQ9HBI1 364 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 INSL5Q9Y5Q6 135 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 ZNF840PA6NDX5 716 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 NRP2O60462 931 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 FYNP06241 537 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 UBTFL6P0CB48 400 aaPredicted RBP7.32□□□□□ -1.24
NPHP3-208ENST00000490993 HOXB6P17509 224 aaKnown RBP7.32□□□□□ -1.24
NPHP3-208ENST00000490993 PEX19P40855 299 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 HALP42357 657 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 IL1RL1Q01638 556 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 DYNC1I2Q13409 638 aaKnown RBP7.32□□□□□ -1.24
NPHP3-208ENST00000490993 ZNF460Q14592 562 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 ACOX1Q15067 660 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 FUT11Q495W5 492 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 ZNF534Q76KX8 674 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 LDB1Q86U70 411 aaPredicted RBP7.32□□□□□ -1.24
NPHP3-208ENST00000490993 KREMEN2Q8NCW0 462 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 PYDC1Q8WXC3 89 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 NR1H4Q96RI1 486 aaPredicted RBP7.32□□□□□ -1.24
NPHP3-208ENST00000490993 EVLQ9UI08 416 aaPredicted RBP7.32□□□□□ -1.24
NPHP3-208ENST00000490993 FKBPLQ9UIM3 349 aa7.32□□□□□ -1.24
NPHP3-208ENST00000490993 C16orf96A6NNT2 1141 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 A8MT66 165 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 COCHO43405 550 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 KERAO60938 352 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SEC22BO75396 215 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 ADH1CP00326 375 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 CATP04040 527 aaKnown RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 PSMC3P17980 439 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 CSKP41240 450 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 GATMP50440 423 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 STC1P52823 247 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 BTKQ06187 659 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 TBCELQ5QJ74 424 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 LINGO4Q6UY18 593 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SNX20Q7Z614 316 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 GALNT7Q86SF2 657 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 CENPLQ8N0S6 344 aaPredicted RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 MIPOL1Q8TD10 442 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 TWIST2Q8WVJ9 160 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 PTCD3Q96EY7 689 aaKnown RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 POLR3BQ9NW08 1133 aaPredicted RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 MRPS23Q9Y3D9 190 aaKnown RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 AP4S1Q9Y587 144 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SLC4A7Q9Y6M7 1214 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 TLL1O43897 1013 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 ULK1O75385 1050 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 ZMPSTE24O75844 475 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 C8AP07357 584 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 HOXC8P31273 242 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 CCR3P51677 355 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 PTPN5P54829 565 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 DMC1Q14565 340 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SLC9B1Q4ZJI4 515 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 INO80DQ53TQ3 878 aaPredicted RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 RTP2Q5QGT7 225 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 TTC7BQ86TV6 843 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 ARHGAP12Q8IWW6 846 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 FAM126BQ8IXS8 530 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 PCDH20Q8N6Y1 951 aaKnown RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SPDYE1Q8NFV5 336 aaPredicted RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 OR13C4Q8NGS5 318 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 MARK4Q96L34 752 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 YIPF3Q9GZM5 350 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 DERL2Q9GZP9 239 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 GKN1Q9NS71 199 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 MOSPD1Q9UJG1 213 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 FCF1Q9Y324 198 aaKnown RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SCN4AP35499 1836 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 ANKRD66B4E2M5 251 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 MATN2O00339 956 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 HNRNPRO43390 633 aaKnown RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 KCNH1O95259 989 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 PRAMEF1O95521 474 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 MZF1P28698 734 aaPredicted RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 AFF1P51825 1210 aaKnown RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 PRKG2Q13237 762 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 BOP1Q14137 746 aaKnown RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SETMARQ53H47 684 aaPredicted RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 TP53INP2Q8IXH6 220 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 GSTCDQ8NEC7 633 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SLC39A13Q96H72 371 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 NSMCE2Q96MF7 247 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 RTP3Q9BQQ7 232 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 CCDC106Q9BWC9 280 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 TRIM45Q9H8W5 580 aaPredicted RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 ARNT2Q9HBZ2 717 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 PSMD13Q9UNM6 376 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms