RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 MUC13Q9H3R2 512 aa19.3■□□□□ 0.68
SNAPC3-206ENST00000490969 ALG2Q9H553 416 aa19.3■□□□□ 0.68
SNAPC3-206ENST00000490969 GIMAP2Q9UG22 337 aa19.3■□□□□ 0.68
SNAPC3-206ENST00000490969 TNPO2O14787 897 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 RSL1D1O76021 490 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 SUPT7LO94864 414 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 RBP1P09455 135 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 LTA4HP09960 611 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 NFKBIAP25963 317 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 SPATS1Q496A3 300 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 CRTC3Q6UUV7 619 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 SLC7A5P1Q8MH63 180 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 TRPV1Q8NER1 839 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 OSCP1Q8WVF1 389 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 SGCDQ92629 289 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 TMEM125Q96AQ2 219 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 EFHD2Q96C19 240 aaPredicted RBP19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 HERC2P3Q9BVR0 1158 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 FUNDC2Q9BWH2 189 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 ADNPQ9H2P0 1102 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 AKIP1Q9NQ31 210 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 FBXO5Q9UKT4 447 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 GABRQQ9UN88 632 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 PFDN6O15212 129 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 AOC2O75106 756 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 UMPSP11172 480 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 IMPDH1P20839 514 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 NR4A1P22736 598 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 CRHBPP24387 322 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 LMO2P25791 158 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 SOX11P35716 441 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 FOXM1Q08050 763 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 SEMA3BQ13214 749 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 R3HCC1LQ7Z5L2 792 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 TFAP2DQ7Z6R9 452 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 TLK2Q86UE8 772 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 ITIH5Q86UX2 942 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 SPARTQ8N0X7 666 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 SMG8Q8ND04 991 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 SPATA22Q8NHS9 363 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 KCTD14Q9BQ13 255 aaPredicted RBP19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 KLHL25Q9H0H3 589 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 TMEM98Q9Y2Y6 226 aa19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 RBMX2Q9Y388 322 aaKnown RBP19.29■□□□□ 0.68
SNAPC3-206ENST00000490969 I6L893 689 aaPredicted RBP19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 IGHA2P01877 340 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 UGT2B4P06133 528 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 S100A1P23297 94 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 LEPRP48357 1165 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 PYCR3Q53H96 274 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 RABL3Q5HYI8 236 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 INTS6LQ5JSJ4 861 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 PTRH1Q86Y79 214 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 PDZD8Q8NEN9 1154 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 PPHLN1Q8NEY8 458 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 SEPHS2Q99611 448 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 TBL1YQ9BQ87 522 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 DNMT3BQ9UBC3 853 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 PTGDR2Q9Y5Y4 395 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 FNDC1Q4ZHG4 1894 aaPredicted RBP19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 PSMD3O43242 534 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 BDNFP23560 247 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 IFITM3Q01628 133 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 TRIM32Q13049 653 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 SKIV2LQ15477 1246 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 RBM48Q5RL73 367 aaKnown RBP19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 SLC16A12Q6ZSM3 486 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 SNX29P2Q8IUI4 249 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 CRYBG2Q8N1P7 616 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 DNAJB14Q8TBM8 379 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 BDH2Q9BUT1 245 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 TRIM54Q9BYV2 358 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 MAGEE1Q9HCI5 957 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 PCDHGA11Q9Y5H2 935 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 DNAJC15Q9Y5T4 150 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 V9GYQ6 96 aa19.28■□□□□ 0.68
SNAPC3-206ENST00000490969 MYADML2A6NDP7 307 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 LIPEQ05469 1076 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 GRB7Q14451 532 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 TMEM214Q6NUQ4 689 aaKnown RBP19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 ANKRD13BQ86YJ7 626 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 CLYBLQ8N0X4 340 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 FAM49AQ9H0Q0 323 aaPredicted RBP19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 GINS2Q9Y248 185 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 TGM1P22735 817 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 TKTP29401 623 aaKnown RBP19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 GSSP48637 474 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 APLP1P51693 650 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 ARSFP54793 590 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 ACAP2Q15057 778 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 ZNF678Q5SXM1 525 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 THAP5Q7Z6K1 395 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 DCP1BQ8IZD4 617 aaKnown RBP19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 IPMKQ8NFU5 416 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 SLC22A17Q8WUG5 538 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 ZMAT2Q96NC0 199 aaKnown RBP19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 CGREF1Q99674 301 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 HGH1Q9BTY7 390 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 CHID1Q9BWS9 393 aa19.27■□□□□ 0.68
SNAPC3-206ENST00000490969 HPS4Q9NQG7 708 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms