RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ZNF462Q96JM2 2506 aa10.34□□□□□ -0.75
TTC28-207ENST00000490475 A0A1W2PNU3 283 aaPredicted RBP10.33□□□□□ -0.76
TTC28-207ENST00000490475 A0A1W2PQM1 296 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 B4DGG1 531 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 ARHGAP6O43182 974 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 PSTPIP1O43586 416 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 NOBOXO60393 691 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 ZRANB2O95218 330 aaKnown RBP eCLIP10.33□□□□□ -0.76
TTC28-207ENST00000490475 PGLSO95336 258 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 ITGB2P05107 769 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 PRKCGP05129 697 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 IVLP07476 585 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 MX2P20592 715 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 GARSP41250 739 aaKnown RBP10.33□□□□□ -0.76
TTC28-207ENST00000490475 CDKN2BP42772 138 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 EPHB1P54762 984 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 RPL26P61254 145 aaKnown RBP10.33□□□□□ -0.76
TTC28-207ENST00000490475 DYNLT1P63172 113 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 CDK3Q00526 305 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 GALNT2Q10471 571 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 CLN3Q13286 438 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 LRP8Q14114 963 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 NR1D2Q14995 579 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 CNGA3Q16281 694 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 MAP9Q49MG5 647 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 KAZNQ674X7 775 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 SLC9A4Q6AI14 798 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 RAET1GQ6H3X3 334 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 SPOCD1Q6ZMY3 1216 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 B4GALNT4Q76KP1 1039 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 ZNF765Q7L2R6 523 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 ZNF438Q7Z4V0 828 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 HEATR4Q86WZ0 1026 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 KATNAL2Q8IYT4 538 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 RCOR2Q8IZ40 523 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 CBARPQ8N350 705 aaPredicted RBP10.33□□□□□ -0.76
TTC28-207ENST00000490475 PGBD5Q8N414 524 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 AVL9Q8NBF6 648 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 CCNYQ8ND76 341 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 MYRIPQ8NFW9 859 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 ZDHHC1Q8WTX9 485 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 MED8Q96G25 268 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 CALR3Q96L12 384 aaKnown RBP10.33□□□□□ -0.76
TTC28-207ENST00000490475 MCCC1Q96RQ3 725 aaPredicted RBP10.33□□□□□ -0.76
TTC28-207ENST00000490475 HEMGNQ9BXL5 484 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 CAAP1Q9H8G2 361 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 NOD2Q9HC29 1040 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 DTLQ9NZJ0 730 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 SAE1Q9UBE0 346 aaPredicted RBP10.33□□□□□ -0.76
TTC28-207ENST00000490475 RABGEF1Q9UJ41 708 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 GUCA1BQ9UMX6 200 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 RPL26L1Q9UNX3 145 aaKnown RBP10.33□□□□□ -0.76
TTC28-207ENST00000490475 LOXL2Q9Y4K0 774 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 PCDHGC4Q9Y5F7 938 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 PCDHA3Q9Y5H8 950 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.33□□□□□ -0.76
TTC28-207ENST00000490475 SPTA1P02549 2419 aa10.33□□□□□ -0.76
TTC28-207ENST00000490475 SCN8AQ9UQD0 1980 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 CFAP46Q8IYW2 2715 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 UQCRHLA0A096LP55 91 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 GOLGA6CA6NDK9 693 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 GOLGA6BA6NDN3 693 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 ZNF487B1APH4 448 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 APOL1O14791 398 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 MATN3O15232 486 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 CST8O60676 142 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 C1QL1O75973 258 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 PRB1P04280 392 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 UQCRHP07919 91 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 GOLGA6DP0CG33 693 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 SLC2A4P14672 509 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 CCNCP24863 283 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 GPR1P46091 355 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 GPLD1P80108 840 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 CCZ1BP86790 482 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 CCZ1P86791 482 aaPredicted RBP10.32□□□□□ -0.76
TTC28-207ENST00000490475 SQSTM1Q13501 440 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 TAZQ16635 292 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 IFI16Q16666 785 aaKnown RBP10.32□□□□□ -0.76
TTC28-207ENST00000490475 USP53Q70EK8 1073 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 B3GNT8Q7Z7M8 397 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 NT5DC3Q86UY8 548 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 C17orf82Q86X59 251 aaPredicted RBP10.32□□□□□ -0.76
TTC28-207ENST00000490475 VSIG1Q86XK7 387 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 NRSN1Q8IZ57 195 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 TXLNBQ8N3L3 684 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.32□□□□□ -0.76
TTC28-207ENST00000490475 TEX26Q8N6G2 289 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 Q8N9G6 341 aaPredicted RBP10.32□□□□□ -0.76
TTC28-207ENST00000490475 EXD1Q8NHP7 514 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.32□□□□□ -0.76
TTC28-207ENST00000490475 TTC9Q92623 222 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 SGF29Q96ES7 293 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 TSGA13Q96PP4 275 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 LGR4Q9BXB1 951 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 FRMD8Q9BZ67 464 aaPredicted RBP10.32□□□□□ -0.76
TTC28-207ENST00000490475 FOXP3Q9BZS1 431 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 STN1Q9H668 368 aaKnown RBP10.32□□□□□ -0.76
TTC28-207ENST00000490475 NT5MQ9NPB1 228 aa10.32□□□□□ -0.76
TTC28-207ENST00000490475 MRPL40Q9NQ50 206 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms