RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 MCCC1Q96RQ3 725 aaPredicted RBP8.15□□□□□ -1.1
USP39-216ENST00000490193 SLC38A3Q99624 504 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 EPB41L1Q9H4G0 881 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 SUDS3Q9H7L9 328 aaPredicted RBP8.15□□□□□ -1.1
USP39-216ENST00000490193 SP110Q9HB58 689 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 SARS2Q9NP81 518 aaKnown RBP8.15□□□□□ -1.1
USP39-216ENST00000490193 NPDC1Q9NQX5 325 aaPredicted RBP8.15□□□□□ -1.1
USP39-216ENST00000490193 SIDT1Q9NXL6 827 aaKnown RBP8.15□□□□□ -1.1
USP39-216ENST00000490193 PHTF1Q9UMS5 762 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 PPIL1Q9Y3C6 166 aa8.15□□□□□ -1.1
USP39-216ENST00000490193 CRYBG3Q68DQ2 2970 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 CELSR2Q9HCU4 2923 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 SHANK1Q9Y566 2161 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 LRBAP50851 2863 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 PRRC2CQ9Y520 2896 aaKnown RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 MN1Q10571 1320 aaPredicted RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 ANKRD62A6NC57 917 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 NPIPB15A6NHN6 443 aaPredicted RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 ENO4A6NNW6 628 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 EEF2KO00418 725 aaKnown RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 POLR1CO15160 346 aaPredicted RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 WIPF1O43516 503 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 WFS1O76024 890 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 RECKO95980 971 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 CPP00450 1065 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 KRT7P08729 469 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 CYP2A6P11509 494 aaPredicted RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 ERCC2P18074 760 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 EEF1GP26641 437 aaKnown RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 HSPA9P38646 679 aaKnown RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 POLD2P49005 469 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 SCNN1BP51168 640 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 COPB1P53618 953 aaKnown RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 RPL7AP62424 266 aaKnown RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 LBRQ14739 615 aaKnown RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 RALGPS1Q5JS13 557 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 ATP1A1-AS1Q5TC04 95 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 HIST2H2BCQ6DN03 193 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 RAET1GQ6H3X3 334 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 CAPRIN2Q6IMN6 1127 aaKnown RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 DNAJC24Q6P3W2 148 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 Q6ZVL8 140 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 ZNF765Q7L2R6 523 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 KDELC2Q7Z4H8 507 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 CCDC13Q8IYE1 715 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 NPWQ8N729 165 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 PAF1Q8N7H5 531 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 TEX19Q8NA77 164 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 GALNT11Q8NCW6 608 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 SH3KBP1Q96B97 665 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 COX14Q96I36 57 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 MCEEQ96PE7 176 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 NUDCD1Q96RS6 583 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 CTRCQ99895 268 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 VPS16Q9H269 839 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 APMAPQ9HDC9 416 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 PRDM8Q9NQV8 689 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 AP4E1Q9UPM8 1137 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 PLEKHM1Q9Y4G2 1056 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 PCDHGC4Q9Y5F7 938 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 RPS6KL1Q9Y6S9 549 aa8.14□□□□□ -1.11
USP39-216ENST00000490193 RP1L1Q8IWN7 2480 aaPredicted RBP8.14□□□□□ -1.11
USP39-216ENST00000490193 CREBBPQ92793 2442 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 A6NCN8 305 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 GOLGA6L3A6NEY3 463 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 LILRA5A6NI73 299 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 K7EM74 188 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 VPS4BO75351 444 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 RFPL1O75677 317 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 MAP3K6O95382 1288 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 EML2O95834 649 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 PEX11BO96011 259 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 C9P02748 559 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 PYGLP06737 847 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 FURINP09958 794 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 DESP17661 470 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 NR1D1P20393 614 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 F8A1P23610 371 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 GPR1P46091 355 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 HCAR3P49019 387 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 ZNF135P52742 658 aaPredicted RBP8.13□□□□□ -1.11
USP39-216ENST00000490193 PMS2P54278 862 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 MLLT10P55197 1068 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 POLR2FP61218 127 aaKnown RBP8.13□□□□□ -1.11
USP39-216ENST00000490193 OGDHQ02218 1023 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 HHEXQ03014 270 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 SLC10A7Q0GE19 358 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 TRAF2Q12933 501 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 CA9Q16790 459 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 TCP11X2Q5H9J9 407 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 C16orf46Q6P387 395 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 IYDQ6PHW0 289 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 ARHGAP36Q6ZRI8 547 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 RFX8Q6ZV50 586 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 ASB18Q6ZVZ8 466 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 USP45Q70EL2 814 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 ZNF761Q86XN6 746 aaPredicted RBP8.13□□□□□ -1.11
USP39-216ENST00000490193 GALNT13Q8IUC8 556 aa8.13□□□□□ -1.11
USP39-216ENST00000490193 PSTKQ8IV42 348 aaKnown RBP8.13□□□□□ -1.11
USP39-216ENST00000490193 APLFQ8IW19 511 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms