RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 ADAMTSL4Q6UY14 1074 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 GALNT13Q8IUC8 556 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 PGBD5Q8N414 524 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 ESX1Q8N693 406 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 RNF31Q96EP0 1072 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 ZNF599Q96NL3 588 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 NUDCD1Q96RS6 583 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 PEBP4Q96S96 227 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 EIF3CQ99613 913 aaKnown RBP13.87□□□□□ -0.19
VARS-227ENST00000489979 SNRNP25Q9BV90 132 aaKnown RBP13.87□□□□□ -0.19
VARS-227ENST00000489979 ABCG8Q9H221 673 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 NOD2Q9HC29 1040 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 PCSK1NQ9UHG2 260 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 DACH1Q9UI36 760 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 KCNMB2Q9Y691 235 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 RPS6KL1Q9Y6S9 549 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 UNC79Q9P2D8 2635 aa13.87□□□□□ -0.19
VARS-227ENST00000489979 PGLSO95336 258 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 CTPS1P17812 591 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 PSMA2P25787 234 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 MAPK9P45984 424 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 NOP2P46087 812 aaKnown RBP13.86□□□□□ -0.19
VARS-227ENST00000489979 UQCRFS1P47985 274 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 UBE2HP62256 183 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 LRP8Q14114 963 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 MAP7Q14244 749 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 PPP6R3Q5H9R7 873 aaPredicted RBP13.86□□□□□ -0.19
VARS-227ENST00000489979 TCTN3Q6NUS6 607 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 CCDC13Q8IYE1 715 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 MCOLN2Q8IZK6 566 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 LZTR1Q8N653 840 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 ARFGAP1Q8N6T3 406 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 SCAMP4Q969E2 229 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 AP2M1Q96CW1 435 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 SCRN2Q96FV2 425 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 MCCC1Q96RQ3 725 aaPredicted RBP13.86□□□□□ -0.19
VARS-227ENST00000489979 AGAP2Q99490 1192 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 AGPAT1Q99943 283 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 SARS2Q9NP81 518 aaKnown RBP13.86□□□□□ -0.19
VARS-227ENST00000489979 PLEKHB1Q9UF11 243 aaPredicted RBP13.86□□□□□ -0.19
VARS-227ENST00000489979 PCDHB3Q9Y5E6 796 aa13.86□□□□□ -0.19
VARS-227ENST00000489979 PCYT1BQ9Y5K3 369 aaPredicted RBP13.86□□□□□ -0.19
VARS-227ENST00000489979 CREBBPQ92793 2442 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 CACNA1DQ01668 2161 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 MKRN2OSH3BPM6 223 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 ASMTLO95671 621 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 PEX11BO96011 259 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 FURINP09958 794 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 DLSTP36957 453 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 HSPA9P38646 679 aaKnown RBP13.85□□□□□ -0.19
VARS-227ENST00000489979 MAXP61244 160 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 ERV3-1Q14264 604 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 KRT31Q15323 416 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 ARMC12Q5T9G4 340 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 LRRC66Q68CR7 880 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 ASB18Q6ZVZ8 466 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 USP45Q70EL2 814 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 SH3KBP1Q96B97 665 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 COX14Q96I36 57 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 SMIM14Q96QK8 99 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 MGME1Q9BQP7 344 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 STN1Q9H668 368 aaKnown RBP13.85□□□□□ -0.19
VARS-227ENST00000489979 PRDM8Q9NQV8 689 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 CWC15Q9P013 229 aaKnown RBP13.85□□□□□ -0.19
VARS-227ENST00000489979 TBC1D29Q9UFV1 150 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 ZNHIT2Q9UHR6 403 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 CROTQ9UKG9 612 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 SIK3Q9Y2K2 1263 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 PRKAB1Q9Y478 270 aa13.85□□□□□ -0.19
VARS-227ENST00000489979 INPP4BO15327 924 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 AGFG2O95081 481 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 ZNF28P17035 718 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 PTSQ03393 145 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 FOXM1Q08050 763 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 MAMLD1Q13495 774 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 DPYSQ14117 519 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 FKBP15Q5T1M5 1219 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 FHL5Q5TD97 284 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 ACAD10Q6JQN1 1059 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 IYDQ6PHW0 289 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 C6orf15Q6UXA7 325 aaPredicted RBP13.84□□□□□ -0.19
VARS-227ENST00000489979 CHST15Q7LFX5 561 aaPredicted RBP13.84□□□□□ -0.19
VARS-227ENST00000489979 SLC9B2Q86UD5 537 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 PIH1D2Q8WWB5 315 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 TBC1D10AQ9BXI6 508 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 ULBP3Q9BZM4 244 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 CLSTN2Q9H4D0 955 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 SIDT1Q9NXL6 827 aaKnown RBP13.84□□□□□ -0.19
VARS-227ENST00000489979 POLHQ9Y253 713 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 KCNK6Q9Y257 313 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 PPIL1Q9Y3C6 166 aa13.84□□□□□ -0.19
VARS-227ENST00000489979 TNRC6AQ8NDV7 1962 aaKnown RBP13.83□□□□□ -0.19
VARS-227ENST00000489979 ZNF106Q9H2Y7 1883 aaKnown RBP13.83□□□□□ -0.2
VARS-227ENST00000489979 PRPSAP2O60256 369 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 SNX2O60749 519 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 DNAJC6O75061 913 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 VPS4BO75351 444 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 KATNA1O75449 491 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 RFPL1O75677 317 aa13.83□□□□□ -0.2
VARS-227ENST00000489979 PYGLP06737 847 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms