RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 SNX24Q9Y343 169 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 USP24Q9UPU5 2620 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 DOCK9Q9BZ29 2069 aa10.56□□□□□ -0.72
SCAMP4-208ENST00000489554 MYLKQ15746 1914 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 KMT2BQ9UMN6 2715 aaPredicted RBP10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 IGF2RP11717 2491 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 K7ESM1 405 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 TPP1O14773 563 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 STK10O94804 968 aaKnown RBP10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 MT-CYBP00156 380 aaPredicted RBP10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 CPP00450 1065 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 CAPNS1P04632 268 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 PRKCGP05129 697 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 ELFN1P0C7U0 828 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 CKMT1AP12532 417 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 JUPP14923 745 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 ADRA1AP35348 466 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 CARSP49589 748 aaKnown RBP10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 DUSP3P51452 185 aaPredicted RBP10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 GUCY2DQ02846 1103 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 PPARDQ03181 441 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 RALGDSQ12967 914 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 MTM1Q13496 603 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 HES3Q5TGS1 186 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 HIBCHQ6NVY1 386 aaPredicted RBP10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 ZCCHC8Q6NZY4 707 aaKnown RBP10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 LIPIQ6XZB0 460 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 KDM7AQ6ZMT4 941 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 ARHGEF18Q6ZSZ5 1173 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 PROSER1Q86XN7 944 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 PHACTR4Q8IZ21 702 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 CACTIN-AS1Q8N1I8 211 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 PDCD7Q8N8D1 485 aaKnown RBP10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 LMX1AQ8TE12 382 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 SNF8Q96H20 258 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 MRGPRX2Q96LB1 330 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 APOLD1Q96LR9 279 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 TRIB3Q96RU7 358 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 RBM15Q96T37 977 aaKnown RBP eCLIP10.55□□□□□ -0.724e-6■■■■□ 23.2
SCAMP4-208ENST00000489554 SEMA3CQ99985 751 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 SLC13A1Q9BZW2 595 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 TRIM31Q9BZY9 425 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 POLR1EQ9GZS1 481 aaKnown RBP10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 NOD2Q9HC29 1040 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 EPB41L5Q9HCM4 733 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 RAB6BQ9NRW1 208 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 KCTD5Q9NXV2 234 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 WHRNQ9P202 907 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 DKK4Q9UBT3 224 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 APOBEC3BQ9UH17 382 aaKnown RBP10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 ASIC3Q9UHC3 531 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 RSPH14Q9UHP6 348 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 KLF15Q9UIH9 416 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 PCDHGC4Q9Y5F7 938 aa10.55□□□□□ -0.72
SCAMP4-208ENST00000489554 FAM149AA5PLN7 773 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 SRRM3A6NNA2 597 aaPredicted RBP10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 KRT37O76014 449 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 NEBLO76041 1014 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 RECQL5O94762 991 aaPredicted RBP10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 SUN1O94901 812 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 GP1BAP07359 652 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 CYP2A6P11509 494 aaPredicted RBP10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 TPSB2P20231 275 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 CES1P23141 567 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 TNFRSF8P28908 595 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 FDFT1P37268 417 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 CD86P42081 329 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 GRIA1P42261 906 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 ITGA8P53708 1063 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 VSNL1P62760 191 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 CAMK2BQ13554 666 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 INPP5AQ14642 412 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 NFATC4Q14934 902 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 TPSAB1Q15661 275 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 SLC14A2Q15849 920 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 IZUMO3Q5VZ72 239 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 ITPRIPL1Q6GPH6 555 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 DENND5AQ6IQ26 1287 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 C4orf22Q6V702 233 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 KRT222Q8N1A0 295 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 AGGF1Q8N302 714 aaeCLIP10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 FSTL5Q8N475 847 aaPredicted RBP10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 CCHCR1Q8TD31 782 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 PDCD6IPQ8WUM4 868 aaKnown RBP10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 GLMNQ92990 594 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 ART4Q93070 314 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 FERMT1Q9BQL6 677 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 APOOQ9BUR5 198 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 RAB17Q9H0T7 212 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 VIPAS39Q9H9C1 493 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 EIF2B3Q9NR50 452 aaKnown RBP10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 UBP1Q9NZI7 540 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 B4GALT6Q9UBX8 382 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 PHTF1Q9UMS5 762 aa10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 UTP11Q9Y3A2 253 aaKnown RBP10.54□□□□□ -0.72
SCAMP4-208ENST00000489554 TRABD2BA6NFA1 517 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 LMO7DNF2Z398 122 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 PSMD11O00231 422 aa10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 CACNB4O00305 520 aaPredicted RBP10.53□□□□□ -0.72
SCAMP4-208ENST00000489554 FZD6O60353 706 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms