RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ADAM22Q9P0K1 906 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 HIVEP3Q5T1R4 2406 aa16.06■□□□□ 0.16
USP48-210ENST00000489108 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.05■□□□□ 0.16
USP48-210ENST00000489108 NPIPB15A6NHN6 443 aaPredicted RBP16.05■□□□□ 0.16
USP48-210ENST00000489108 SIGLEC16A6NMB1 481 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 DFFAO00273 331 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 CLDN1O95832 211 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 CPP00450 1065 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 CYP2A6P11509 494 aaPredicted RBP16.05■□□□□ 0.16
USP48-210ENST00000489108 UNGP13051 313 aaPredicted RBP16.05■□□□□ 0.16
USP48-210ENST00000489108 DPTQ07507 201 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 SEMA5AQ13591 1074 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 RFTN1Q14699 578 aaPredicted RBP16.05■□□□□ 0.16
USP48-210ENST00000489108 IYDQ6PHW0 289 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 LYSMD3Q7Z3D4 306 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 GALNT13Q8IUC8 556 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 ARHGAP12Q8IWW6 846 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 LZTR1Q8N653 840 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 SH3KBP1Q96B97 665 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 STAMBPL1Q96FJ0 436 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 PSKH2Q96QS6 385 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 PCDHB18PQ96TA0 734 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 TBC1D10AQ9BXI6 508 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 ABCG8Q9H221 673 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 TBC1D29Q9UFV1 150 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 ZNHIT2Q9UHR6 403 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 KCND3Q9UK17 655 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 PHTF1Q9UMS5 762 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 PRKAB1Q9Y478 270 aa16.05■□□□□ 0.16
USP48-210ENST00000489108 PCYT1BQ9Y5K3 369 aaPredicted RBP16.05■□□□□ 0.16
USP48-210ENST00000489108 PRRC2CQ9Y520 2896 aaKnown RBP16.04■□□□□ 0.16
USP48-210ENST00000489108 TCP11X1B4DZS4 312 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 PSMD11O00231 422 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 KIAA0754O94854 1291 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 RENBPP51606 427 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 ZNF143P52747 638 aaPredicted RBP16.04■□□□□ 0.16
USP48-210ENST00000489108 AIF1P55008 147 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 GFERP55789 205 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 SH3BP2P78314 561 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 IL10RBQ08334 325 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 SLC10A7Q0GE19 358 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 MRPL49Q13405 166 aaKnown RBP16.04■□□□□ 0.16
USP48-210ENST00000489108 LRP8Q14114 963 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 TPD52L1Q16890 204 aaPredicted RBP16.04■□□□□ 0.16
USP48-210ENST00000489108 ADAMTSL4Q6UY14 1074 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 PLXDC1Q8IUK5 500 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 PRR7Q8TB68 274 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 SCAMP4Q969E2 229 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 AP2M1Q96CW1 435 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 ELMO2Q96JJ3 720 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 OR6C1Q96RD1 312 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 AGAP2Q99490 1192 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 TUBGCP2Q9BSJ2 902 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 VPS16Q9H269 839 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 STN1Q9H668 368 aaKnown RBP16.04■□□□□ 0.16
USP48-210ENST00000489108 KIAA1468Q9P260 1216 aa16.04■□□□□ 0.16
USP48-210ENST00000489108 RCOR3Q9P2K3 495 aaPredicted RBP16.04■□□□□ 0.16
USP48-210ENST00000489108 ANKRD17O75179 2603 aaKnown RBP16.04■□□□□ 0.16
USP48-210ENST00000489108 ZNF106Q9H2Y7 1883 aaKnown RBP16.03■□□□□ 0.16
USP48-210ENST00000489108 A0A1W2PQ67 120 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 EEF2KO00418 725 aaKnown RBP16.03■□□□□ 0.16
USP48-210ENST00000489108 PES1O00541 588 aaKnown RBP16.03■□□□□ 0.16
USP48-210ENST00000489108 SORBS2O94875 1100 aaKnown RBP16.03■□□□□ 0.16
USP48-210ENST00000489108 NDUFA10O95299 355 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 ASMTLO95671 621 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 RECKO95980 971 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 ANKRD34CP0C6C1 535 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 CTPS1P17812 591 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 HTR7P34969 479 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 SEPHS1P49903 392 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 EPHA4P54764 986 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 GSCP56915 257 aaPredicted RBP16.03■□□□□ 0.16
USP48-210ENST00000489108 RPL7AP62424 266 aaKnown RBP16.03■□□□□ 0.16
USP48-210ENST00000489108 LBRQ14739 615 aaKnown RBP16.03■□□□□ 0.16
USP48-210ENST00000489108 INPP5JQ15735 1006 aaPredicted RBP16.03■□□□□ 0.16
USP48-210ENST00000489108 CA9Q16790 459 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 HSP90AA4PQ58FG1 418 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 CHST15Q7LFX5 561 aaPredicted RBP16.03■□□□□ 0.16
USP48-210ENST00000489108 SLC9B2Q86UD5 537 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 RASGRP3Q8IV61 690 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 TP53INP2Q8IXH6 220 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 C3orf20Q8ND61 904 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 SCRN2Q96FV2 425 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 C9orf72Q96LT7 481 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 NOD2Q9HC29 1040 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 CNOT8Q9UFF9 292 aaKnown RBP16.03■□□□□ 0.16
USP48-210ENST00000489108 PADI1Q9ULC6 663 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 PCDHGA6Q9Y5G7 932 aa16.03■□□□□ 0.16
USP48-210ENST00000489108 MN1Q10571 1320 aaPredicted RBP16.02■□□□□ 0.16
USP48-210ENST00000489108 TCRBV5S1A1TA0A578 114 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 DAPK3O43293 454 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 SNX2O60749 519 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 DNAJC6O75061 913 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 SOCS5O75159 536 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 CCNYL3P0C7X3 344 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 ERCC2P18074 760 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 POU3F2P20265 443 aaPredicted RBP16.02■□□□□ 0.16
USP48-210ENST00000489108 NFKBIAP25963 317 aa16.02■□□□□ 0.16
USP48-210ENST00000489108 NSFP46459 744 aaKnown RBP16.02■□□□□ 0.16
USP48-210ENST00000489108 PGDP52209 483 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms