RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 AGAP3Q96P47 875 aa22.88■■□□□ 1.25
COL9A3-213ENST00000489045 OR2M4Q96R27 311 aa22.88■■□□□ 1.25
COL9A3-213ENST00000489045 STRADBQ9C0K7 418 aa22.88■■□□□ 1.25
COL9A3-213ENST00000489045 PLEKHM1Q9Y4G2 1056 aa22.88■■□□□ 1.25
COL9A3-213ENST00000489045 CDRT15L2A8MXV6 281 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 ANKRD66B4E2M5 251 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 TNFSF15O95150 251 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 CCKBRP32239 447 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 ACTR1BP42025 376 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 MAGEA1P43355 309 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 NOP2P46087 812 aaKnown RBP22.87■■□□□ 1.25
COL9A3-213ENST00000489045 ACTR1AP61163 376 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 RAB11FIP2Q7L804 512 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 PATE1Q8WXA2 126 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 IMP4Q96G21 291 aaKnown RBP22.87■■□□□ 1.25
COL9A3-213ENST00000489045 TMEM74Q96NL1 305 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 WDR24Q96S15 920 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 ADGRE3Q9BY15 652 aa22.87■■□□□ 1.25
COL9A3-213ENST00000489045 TMX2-CTNND1H3BSU7 103 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 PLD2O14939 933 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 ECEL1O95672 775 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 ITGA2BP08514 1039 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 MLLT3P42568 568 aaPredicted RBP22.86■■□□□ 1.25
COL9A3-213ENST00000489045 CDKN2BP42772 138 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 SPINT3P49223 89 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 HADHBP55084 474 aaKnown RBP22.86■■□□□ 1.25
COL9A3-213ENST00000489045 CXADRP78310 365 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 EIF3IQ13347 325 aaKnown RBP22.86■■□□□ 1.25
COL9A3-213ENST00000489045 BROXQ5VW32 411 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 KDELC2Q7Z4H8 507 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 CLEC14AQ86T13 490 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 NT5DC3Q86UY8 548 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 FBXO39Q8N4B4 442 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 CCHCR1Q8TD31 782 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 TRIB3Q96RU7 358 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 BRD8Q9H0E9 1235 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 GOLPH3Q9H4A6 298 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 PKD2L2Q9NZM6 624 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 ALG6Q9Y672 507 aa22.86■■□□□ 1.25
COL9A3-213ENST00000489045 RHPN2P1A8MT19 583 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 KLK10O43240 276 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 PSTPIP1O43586 416 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 ASMTLO95671 621 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 HGFP14210 728 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 UGT1A5P35504 534 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 B4GALNT1Q00973 533 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 PEX6Q13608 980 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 TAZQ16635 292 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 PYCR3Q53H96 274 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 HENMT1Q5T8I9 393 aaKnown RBP22.85■■□□□ 1.25
COL9A3-213ENST00000489045 LYSMD3Q7Z3D4 306 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 TMPRSS9Q7Z410 1059 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 ZNF438Q7Z4V0 828 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 GALNT13Q8IUC8 556 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 NAGSQ8N159 534 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 DPH1Q9BZG8 443 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 SLC25A51Q9H1U9 297 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 FAM83DQ9H4H8 585 aa22.85■■□□□ 1.25
COL9A3-213ENST00000489045 SAE1Q9UBE0 346 aaPredicted RBP22.85■■□□□ 1.25
COL9A3-213ENST00000489045 SMG1Q96Q15 3661 aaKnown RBP22.84■■□□□ 1.25
COL9A3-213ENST00000489045 FADS2P1A8MWK0 482 aa22.84■■□□□ 1.25
COL9A3-213ENST00000489045 LCA5LO95447 670 aa22.84■■□□□ 1.25
COL9A3-213ENST00000489045 ATP1A1P05023 1023 aaKnown RBP22.84■■□□□ 1.25
COL9A3-213ENST00000489045 PECAM1P16284 738 aaPredicted RBP22.84■■□□□ 1.25
COL9A3-213ENST00000489045 OR1D5P58170 312 aa22.84■■□□□ 1.25
COL9A3-213ENST00000489045 ZFP36L1Q07352 338 aaKnown RBP22.84■■□□□ 1.25
COL9A3-213ENST00000489045 LLGL1Q15334 1064 aa22.84■■□□□ 1.25
COL9A3-213ENST00000489045 PCSK7Q16549 785 aa22.84■■□□□ 1.25
COL9A3-213ENST00000489045 MAP9Q49MG5 647 aa22.84■■□□□ 1.25
COL9A3-213ENST00000489045 KAZNQ674X7 775 aa22.84■■□□□ 1.25
COL9A3-213ENST00000489045 SPOCD1Q6ZMY3 1216 aa22.84■■□□□ 1.25
COL9A3-213ENST00000489045 UBL7Q96S82 380 aaPredicted RBP22.84■■□□□ 1.25
COL9A3-213ENST00000489045 CNOT6Q9ULM6 557 aaKnown RBP22.84■■□□□ 1.25
COL9A3-213ENST00000489045 TFR2Q9UP52 801 aa22.84■■□□□ 1.25
COL9A3-213ENST00000489045 OAS3Q9Y6K5 1087 aaKnown RBP22.84■■□□□ 1.25
COL9A3-213ENST00000489045 MGAQ8IWI9 3026 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 AGRPO00253 132 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 B4GAT1O43505 415 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 CST8O60676 142 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 DNAJC6O75061 913 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 PIRTP0C851 137 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 PTPN3P26045 913 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 NR2C2P49116 596 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 TMPRSS3P57727 454 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 BIRC2Q13490 618 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 LRP8Q14114 963 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 TFDP2Q14188 446 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 NR1D2Q14995 579 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 PRKD1Q15139 912 aaPredicted RBP22.83■■□□□ 1.25
COL9A3-213ENST00000489045 AMZ1Q400G9 498 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 TEX44Q53QW1 395 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 GPR155Q7Z3F1 870 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 SLITRK4Q8IW52 837 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 SPATA22Q8NHS9 363 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 TADA1Q96BN2 335 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 EID2BQ96D98 161 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 CCDC97Q96F63 343 aaPredicted RBP22.83■■□□□ 1.25
COL9A3-213ENST00000489045 ZFYVE1Q9HBF4 777 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 GLOD4Q9HC38 313 aa22.83■■□□□ 1.25
COL9A3-213ENST00000489045 VPS18Q9P253 973 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms