RNA–Protein interactions for RNA: ENST00000488773.1

SFT2D1-205, Transcript of SFT2 domain containing 1, humanhuman

TSL 5

Gene SFT2D1, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-205ENST00000488773 ELP6Q0PNE2 266 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 KLRB1Q12918 225 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 XRCC4Q13426 336 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 ZNF235Q14590 738 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 IHHQ14623 411 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 PDK1Q15118 436 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 SLC14A2Q15849 920 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 ZFYVE27Q5T4F4 411 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 SEL1L3Q68CR1 1132 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 CAPRIN2Q6IMN6 1127 aaKnown RBP5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 SPOCD1Q6ZMY3 1216 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 BBS12Q6ZW61 710 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 B3GNT8Q7Z7M8 397 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 KIAA1328Q86T90 577 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 NT5DC3Q86UY8 548 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 ZC3H18Q86VM9 953 aaKnown RBP5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 ZSWIM9Q86XI8 627 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 RAVER1Q8IY67 606 aaKnown RBP5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 CCDC13Q8IYE1 715 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 SYCE1Q8N0S2 351 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 EFCAB3Q8N7B9 438 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 CNTD1Q8N815 330 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 TEX19Q8NA77 164 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 DENND6BQ8NEG7 585 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 ZNF548Q8NEK5 533 aaPredicted RBP5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 OR13H1Q8NG92 308 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 ARRDC2Q8TBH0 407 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 LMX1AQ8TE12 382 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 KRT35Q92764 455 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 USP7Q93009 1102 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 TADA1Q96BN2 335 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 IFT43Q96FT9 208 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 SCRN2Q96FV2 425 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 ABHD17AQ96GS6 310 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 RBM41Q96IZ5 413 aaKnown RBP5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 BMFQ96LC9 184 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 ZNF830Q96NB3 372 aaPredicted RBP5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 GFM1Q96RP9 751 aaKnown RBP5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 CCDC3Q9BQI4 270 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 PLCD4Q9BRC7 762 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 SLC12A9Q9BXP2 914 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 POLR1EQ9GZS1 481 aaKnown RBP5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 GOLPH3Q9H4A6 298 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 GRPEL1Q9HAV7 217 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 NOD2Q9HC29 1040 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 FZD3Q9NPG1 666 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 PCDH12Q9NPG4 1184 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 HAUS2Q9NVX0 235 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 RBM22Q9NW64 420 aaKnown RBP eCLIP5.6□□□□□ -1.511e-6■■■■■ 27.9
SFT2D1-205ENST00000488773 FOXJ2Q9P0K8 574 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 PHTF1Q9UMS5 762 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 LOXL2Q9Y4K0 774 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 HEY1Q9Y5J3 304 aa5.6□□□□□ -1.51
SFT2D1-205ENST00000488773 A0A0U1RQJ8 604 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 PRR19A6NJB7 356 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 MIF4GDA9UHW6 222 aaKnown RBP5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 HACD1B0YJ81 288 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 H3BM21 787 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 KCNK1O00180 336 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 NEMP1O14524 444 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 PPP1R12AO14974 1030 aaPredicted RBP5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 RAD51BO15315 384 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 AQP9O43315 295 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 CST8O60676 142 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 MMP20O60882 483 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 TM7SF2O76062 418 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 PGLSO95336 258 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 DDAH2O95865 285 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 PRLP01236 227 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 JCHAINP01591 159 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 PRKCGP05129 697 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 MMP2P08253 660 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 PYGMP11217 842 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 ITIH2P19823 946 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 ITIH1P19827 911 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 XPAP23025 273 aaPredicted RBP5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 MMP12P39900 470 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 MARCKSL1P49006 195 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 ATP1A2P50993 1020 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 RWDD2BP57060 319 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 CLDN2P57739 230 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 PFN3P60673 137 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 MAXP61244 160 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 RPL26P61254 145 aaKnown RBP5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 YPEL5P62699 121 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 NIPAL4Q0D2K0 466 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 TRAF2Q12933 501 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 RALGDSQ12967 914 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 SGCGQ13326 291 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 PRKD1Q15139 912 aaPredicted RBP5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 KRTAP21-3Q3LHN1 58 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 LACTB2Q53H82 288 aaPredicted RBP5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 TEX44Q53QW1 395 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 ODF2Q5BJF6 829 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 C1QL3Q5VWW1 255 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 ERAP2Q6P179 960 aa5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 KYAT3Q6YP21 454 aaKnown RBP5.59□□□□□ -1.51
SFT2D1-205ENST00000488773 GCNT7Q6ZNI0 430 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms