RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 A8MX80 341 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 ANKRD66B4E2M5 251 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 TBC1D3LB9A6J9 549 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 MAP3K13O43283 966 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 USP12O75317 370 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 AVILO75366 819 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 NDST3O95803 873 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 INHBAP08476 426 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 TBC1D3HP0C7X1 549 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 MLNP12872 115 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 GRIA4P48058 902 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 SUOXP51687 545 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 EPHB1P54762 984 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 SLC18A2Q05940 514 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 RALGDSQ12967 914 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 MTM1Q13496 603 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 PLK5Q496M5 336 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 HHATQ5VTY9 493 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 TBC1D3GQ6DHY5 549 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 TBC1D3CQ6IPX1 549 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 RANBP10Q6VN20 620 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 SLC26A11Q86WA9 606 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 SLC41A1Q8IVJ1 513 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 TMEFF1Q8IYR6 380 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 TBC1D3Q8IZP1 549 aaPredicted RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 RMDN1Q96DB5 314 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 SCRN2Q96FV2 425 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 APOL2Q9BQE5 337 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 ADGRE3Q9BY15 652 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 PITPNM3Q9BZ71 974 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 DUSP15Q9H1R2 295 aaPredicted RBP19.34■□□□□ 0.69
CCM2-216ENST00000488727 KCNH6Q9H252 994 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 PLAC1Q9HBJ0 212 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 PREBQ9HCU5 417 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 GRID1Q9ULK0 1009 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 IKBKGQ9Y6K9 419 aa19.34■□□□□ 0.69
CCM2-216ENST00000488727 DMDP11532 3685 aa19.33■□□□□ 0.69
CCM2-216ENST00000488727 SDK1Q7Z5N4 2213 aa19.33■□□□□ 0.69
CCM2-216ENST00000488727 PCDH8O95206 1070 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 AP2A1O95782 977 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 EPOP01588 193 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 HNF1BP35680 557 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 PTPN5P54829 565 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 ELP6Q0PNE2 266 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 GALNTL6Q49A17 601 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 SIRPB2Q5JXA9 342 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 PMS2CLQ68D20 193 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 ERAP2Q6P179 960 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 LVRNQ6Q4G3 990 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 CEP68Q76N32 757 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 DPPA4Q7L190 304 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 SLC25A41Q8N5S1 370 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 LRRC8CQ8TDW0 803 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 CFAP36Q96G28 342 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 SIGLEC10Q96LC7 697 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 PAIP2Q9BPZ3 127 aaKnown RBP19.33■□□□□ 0.68
CCM2-216ENST00000488727 ABCF3Q9NUQ8 709 aa19.33■□□□□ 0.68
CCM2-216ENST00000488727 ZFR2Q9UPR6 939 aaKnown RBP19.33■□□□□ 0.68
CCM2-216ENST00000488727 MYLKQ15746 1914 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 CAPN8A6NHC0 703 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 NEMP1O14524 444 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 TSPAN6O43657 245 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 EDF1O60869 148 aaKnown RBP19.32■□□□□ 0.68
CCM2-216ENST00000488727 RNGTTO60942 597 aaKnown RBP19.32■□□□□ 0.68
CCM2-216ENST00000488727 MT-ND3P03897 115 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 IGHV4-34P06331 123 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 LHCGRP22888 699 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 SARNPP82979 210 aaKnown RBP19.32■□□□□ 0.68
CCM2-216ENST00000488727 SIM2Q14190 667 aaPredicted RBP19.32■□□□□ 0.68
CCM2-216ENST00000488727 TMEM52BQ4KMG9 183 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 SEL1L3Q68CR1 1132 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 ZC3H14Q6PJT7 736 aaKnown RBP19.32■□□□□ 0.68
CCM2-216ENST00000488727 SH2D5Q6ZV89 423 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 USP45Q70EL2 814 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 TSPAN33Q86UF1 283 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 CADM4Q8NFZ8 388 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 ZC3H10Q96K80 434 aaKnown RBP19.32■□□□□ 0.68
CCM2-216ENST00000488727 EBNA1BP2Q99848 306 aaKnown RBP19.32■□□□□ 0.68
CCM2-216ENST00000488727 TBL1YQ9BQ87 522 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 WRAP53Q9BUR4 548 aaKnown RBP19.32■□□□□ 0.68
CCM2-216ENST00000488727 LRRC40Q9H9A6 602 aa19.32■□□□□ 0.68
CCM2-216ENST00000488727 GON4LQ3T8J9 2241 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 A0A1W2PQU0 124 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 RASSF9O75901 435 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 PIRTP0C851 137 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 PTGER3P43115 390 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 TMEM259Q4ZIN3 620 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 KIAA0895LQ68EN5 471 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 DENND5AQ6IQ26 1287 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 NEK5Q6P3R8 708 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 CYS1Q717R9 158 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 C11orf74Q86VG3 221 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 TRIM69Q86WT6 500 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 BIRC7Q96CA5 298 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 APOPT1Q96IL0 206 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 HSPA12BQ96MM6 686 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 FAM86C1Q9NVL1 165 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 KLHL14Q9P2G3 628 aa19.31■□□□□ 0.68
CCM2-216ENST00000488727 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.31■□□□□ 0.68
CCM2-216ENST00000488727 PLXNA2O75051 1894 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms