RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 ZIC5Q96T25 663 aa14.19□□□□□ -0.14
RER1-207ENST00000488353 KATNAL1Q9BW62 490 aa14.19□□□□□ -0.14
RER1-207ENST00000488353 MRPL46Q9H2W6 279 aaKnown RBP14.19□□□□□ -0.14
RER1-207ENST00000488353 SIAEQ9HAT2 523 aa14.19□□□□□ -0.14
RER1-207ENST00000488353 INTS10Q9NVR2 710 aaKnown RBP14.19□□□□□ -0.14
RER1-207ENST00000488353 B4GAT1O43505 415 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 BCAS1O75363 584 aaPredicted RBP14.18□□□□□ -0.14
RER1-207ENST00000488353 JCHAINP01591 159 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 ALBP02768 609 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 KCNE1P15382 129 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 ELK4P28324 431 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 OXTRP30559 389 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 RCVRNP35243 200 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 RFC2P35250 354 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 TPTEP56180 551 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 GJA9P57773 515 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 SPCS2Q15005 226 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 MAPRE1Q15691 268 aaKnown RBP14.18□□□□□ -0.14
RER1-207ENST00000488353 EML3Q32P44 896 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 SV2CQ496J9 727 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 KIAA0319Q5VV43 1072 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 RGMBQ6NW40 437 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 SPNS2Q8IVW8 549 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 EDEM1Q92611 657 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 ING2Q9H160 280 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 SOX17Q9H6I2 414 aaPredicted RBP14.18□□□□□ -0.14
RER1-207ENST00000488353 MRM3Q9HC36 420 aaKnown RBP14.18□□□□□ -0.14
RER1-207ENST00000488353 DNMT3BQ9UBC3 853 aaKnown RBP14.18□□□□□ -0.14
RER1-207ENST00000488353 WARS2Q9UGM6 360 aaKnown RBP14.18□□□□□ -0.14
RER1-207ENST00000488353 TIMM13Q9Y5L4 95 aaPredicted RBP14.18□□□□□ -0.14
RER1-207ENST00000488353 MSI1O43347 362 aaKnown RBP14.18□□□□□ -0.14
RER1-207ENST00000488353 USP17L7P0C7H9 530 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 NCAM1P13591 858 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 AKR1A1P14550 325 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 TCEA1P23193 301 aaKnown RBP14.18□□□□□ -0.14
RER1-207ENST00000488353 ARCN1P48444 511 aaKnown RBP14.18□□□□□ -0.14
RER1-207ENST00000488353 STX1BP61266 288 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 ZNF460Q14592 562 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 PGS1Q32NB8 556 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 XKR4Q5GH76 650 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 PLEKHG7Q6ZR37 379 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 OTOP3Q7RTS5 596 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 GPRIN1Q7Z2K8 1008 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 LINC00523Q86TU6 105 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 ATP6V0D2Q8N8Y2 350 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 LPPQ93052 612 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 FKBP10Q96AY3 582 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 NXNL1Q96CM4 212 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 MUS81Q96NY9 551 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 GPR78Q96P69 363 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 POMKQ9H5K3 350 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 DDIT4Q9NX09 232 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 MTRRQ9UBK8 725 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 DGKBQ9Y6T7 804 aa14.18□□□□□ -0.14
RER1-207ENST00000488353 GFAPP14136 432 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 ATP5F1P24539 256 aaPredicted RBP14.17□□□□□ -0.14
RER1-207ENST00000488353 ATP4BP51164 291 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 IFITM3Q01628 133 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 CAMK2BQ13554 666 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 DNASE1L3Q13609 305 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 CYP51A1Q16850 503 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 INAVAQ3KP66 663 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 TIGD2Q4W5G0 525 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 KCTD11Q693B1 232 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 PDZD4Q76G19 769 aaPredicted RBP14.17□□□□□ -0.14
RER1-207ENST00000488353 BNIPLQ7Z465 357 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 TBC1D21Q8IYX1 336 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 MINDY1Q8N5J2 469 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 TXNDC5Q8NBS9 432 aaKnown RBP14.17□□□□□ -0.14
RER1-207ENST00000488353 SOCS4Q8WXH5 440 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 SLC2A13Q96QE2 648 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 MRPL57Q9BQC6 102 aaKnown RBP14.17□□□□□ -0.14
RER1-207ENST00000488353 FUNDC2Q9BWH2 189 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 NACA2Q9H009 215 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 OSBPL2Q9H1P3 480 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 WDR6Q9NNW5 1121 aaKnown RBP14.17□□□□□ -0.14
RER1-207ENST00000488353 ZFC3H1O60293 1989 aaKnown RBP14.17□□□□□ -0.14
RER1-207ENST00000488353 C16orf96A6NNT2 1141 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 UGT2B11O75310 529 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 ARSAP15289 507 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 PAX3P23760 479 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 HOXC8P31273 242 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 NPY2RP49146 381 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 RAB10P61026 200 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 AQP6Q13520 282 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 IRF5Q13568 498 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 RBM48Q5RL73 367 aaKnown RBP14.17□□□□□ -0.14
RER1-207ENST00000488353 GDF6Q6KF10 455 aaPredicted RBP14.17□□□□□ -0.14
RER1-207ENST00000488353 RETREG3Q86VR2 466 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 SLC41A1Q8IVJ1 513 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 FUNDC1Q8IVP5 155 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.17□□□□□ -0.14
RER1-207ENST00000488353 ATP13A3Q9H7F0 1226 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 NDUFAF1Q9Y375 327 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 TSC2P49815 1807 aa14.17□□□□□ -0.14
RER1-207ENST00000488353 ARPC2O15144 300 aa14.16□□□□□ -0.14
RER1-207ENST00000488353 DEAF1O75398 565 aaPredicted RBP14.16□□□□□ -0.14
RER1-207ENST00000488353 LDLRP01130 860 aa14.16□□□□□ -0.14
RER1-207ENST00000488353 PNPLA4P41247 253 aa14.16□□□□□ -0.14
RER1-207ENST00000488353 POLD2P49005 469 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms