RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 CAND1Q86VP6 1230 aaKnown RBP13.7□□□□□ -0.22
COPS7B-221ENST00000488111 TMEM25Q86YD3 366 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 SLC15A3Q8IY34 581 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 GALNT4Q8N4A0 578 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 TMEM102Q8N9M5 508 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-221ENST00000488111 S1PR5Q9H228 398 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 PAK5Q9P286 719 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 KLHL8Q9P2G9 620 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-221ENST00000488111 ACTL7AQ9Y615 435 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 C2orf16Q68DN1 1984 aa13.7□□□□□ -0.22
COPS7B-221ENST00000488111 A0A0A0MRY4 1105 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 TYW5A2RUC4 315 aaKnown RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 SOBPA7XYQ1 873 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 H3BNH8 94 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 ZBTB24O43167 697 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 PLIN3O60664 434 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 H6PDO95479 791 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 COL6A2P12110 1019 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 ZNF26P17031 533 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 HOXB8P17481 243 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 XRCC1P18887 633 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 GLDCP23378 1020 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 GRK2P25098 689 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 ARRB2P32121 409 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 GNA12Q03113 381 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 TGFBIQ15582 683 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 PIGGQ5H8A4 983 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 VWA5B1Q5TIE3 1220 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 RNF219Q5W0B1 726 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 CXorf57Q6NSI4 855 aaKnown RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 CES5AQ6NT32 575 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 C16orf46Q6P387 395 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 C16orf89Q6UX73 402 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 UNC5AQ6ZN44 842 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 HJURPQ8NCD3 748 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 ACMSDQ8TDX5 336 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 LRRC39Q96DD0 335 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 PABPC5Q96DU9 382 aaKnown RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 ZNF419Q96HQ0 510 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 SPATA13Q96N96 652 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 ASB16Q96NS5 453 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 FERMT1Q9BQL6 677 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 NUF2Q9BZD4 464 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 RMI1Q9H9A7 625 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 TMED5Q9Y3A6 229 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 C8BP07358 591 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 CNTFP26441 200 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 CCR3P51677 355 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 THOP1P52888 689 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 N4BP2L1Q5TBK1 243 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 CHST9Q7L1S5 443 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 CARM1Q86X55 608 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 CPXM2Q8N436 756 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 CELF5Q8N6W0 485 aaKnown RBP13.69□□□□□ -0.22
COPS7B-221ENST00000488111 TSGA13Q96PP4 275 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 SP110Q9HB58 689 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 PACSIN3Q9UKS6 424 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 DOCK4Q8N1I0 1966 aa13.69□□□□□ -0.22
COPS7B-221ENST00000488111 HTR3EA5X5Y0 456 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ZNF701M0R085 212 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 MATN3O15232 486 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 GLRA3O75311 464 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 BMP10O95393 424 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 HOXD9P28356 352 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 MZF1P28698 734 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 HALP42357 657 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 MAGEA6P43360 314 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 YBEYP58557 167 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 SERINC3Q13530 473 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 CDH18Q13634 790 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 CYTH1Q15438 398 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 PARP15Q460N3 678 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 MPPE1Q53F39 396 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 TRMT10BQ6PF06 316 aaKnown RBP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 BNC2Q6ZN30 1099 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 CNTD1Q8N815 330 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 SMARCD2Q92925 531 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ITPKCQ96DU7 683 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ZFYVE19Q96K21 471 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ZNF597Q96LX8 424 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 MUC3BQ9H195 1237 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 VPS45Q9NRW7 570 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 TBC1D23Q9NUY8 699 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ZMYM5Q9UJ78 669 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 CDH7Q9ULB5 785 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 FUOMA2VDF0 154 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 FBP2O00757 339 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ZNF12P17014 697 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 PSMB4P28070 264 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 CD68P34810 354 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 PPARGP37231 505 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ETFBP38117 255 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ABCE1P61221 599 aaKnown RBP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ANO4Q32M45 955 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ANKDD1AQ495B1 522 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 METTL21CQ5VZV1 264 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 EPGNQ6UW88 154 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 OTOP3Q7RTS5 596 aa13.68□□□□□ -0.22
COPS7B-221ENST00000488111 ADGRG2Q8IZP9 1017 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms