RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 ZBTB20Q9HC78 741 aaPredicted RBP2.89□□□□□ -1.95
SMC4-220ENST00000488017 ATAD3AQ9NVI7 634 aa2.89□□□□□ -1.95
SMC4-220ENST00000488017 GEMIN8Q9NWZ8 242 aaKnown RBP2.89□□□□□ -1.95
SMC4-220ENST00000488017 KLHL8Q9P2G9 620 aaPredicted RBP2.89□□□□□ -1.95
SMC4-220ENST00000488017 KIAA1210Q9ULL0 1709 aa2.89□□□□□ -1.95
SMC4-220ENST00000488017 GDAQ9Y2T3 454 aa2.89□□□□□ -1.95
SMC4-220ENST00000488017 DERAQ9Y315 318 aa2.89□□□□□ -1.95
SMC4-220ENST00000488017 SH2D7A6NKC9 451 aaPredicted RBP2.88□□□□□ -1.95
SMC4-220ENST00000488017 PRR32B1ATL7 298 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 BCAT2O15382 392 aaPredicted RBP2.88□□□□□ -1.95
SMC4-220ENST00000488017 ZFAND5O76080 213 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 CSF2RAP15509 400 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 PLIN5Q00G26 463 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 PEX6Q13608 980 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 ADAMTSL4-AS1Q5T5F5 129 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 PLEKHM3Q6ZWE6 761 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 SLC46A3Q7Z3Q1 461 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 LMNTD2Q8IXW0 634 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 SLC35F3Q8IY50 421 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 PCDH20Q8N6Y1 951 aaKnown RBP2.88□□□□□ -1.95
SMC4-220ENST00000488017 THAP6Q8TBB0 222 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 NUF2Q9BZD4 464 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 NDST4Q9H3R1 872 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 HINT3Q9NQE9 182 aaKnown RBP2.88□□□□□ -1.95
SMC4-220ENST00000488017 SRP68Q9UHB9 627 aaKnown RBP2.88□□□□□ -1.95
SMC4-220ENST00000488017 ASIC3Q9UHC3 531 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 LRCH1Q9Y2L9 728 aa2.88□□□□□ -1.95
SMC4-220ENST00000488017 FAM90A7PA6NKC0 464 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 FAM90A22PA8MWA6 464 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 FAM90A12PA8MX19 464 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 FAM90A23PA8MXZ1 464 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 STX16-NPEPL1H3BU86 382 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 STX16O14662 325 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 EIF3DO15371 548 aaKnown RBP eCLIP2.87□□□□□ -1.95
SMC4-220ENST00000488017 ANP32CO43423 234 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 PDE9AO76083 593 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 FAM157CP0CG43 387 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 RPP30P78346 268 aaKnown RBP2.87□□□□□ -1.95
SMC4-220ENST00000488017 PPARDQ03181 441 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 ICA1Q05084 483 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 GRIK3Q13003 919 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 C2orf68Q2NKX9 166 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 KRTCAP3Q53RY4 240 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 FAM83BQ5T0W9 1011 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 FRG2Q64ET8 278 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 DUS1LQ6P1R4 473 aaKnown RBP2.87□□□□□ -1.95
SMC4-220ENST00000488017 KSR2Q6VAB6 950 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 ANO5Q75V66 913 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 ZCCHC9Q8N567 271 aaKnown RBP2.87□□□□□ -1.95
SMC4-220ENST00000488017 ZBTB2Q8N680 514 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 OR5R1Q8NH85 324 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 MRGPRDQ8TDS7 321 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 ABHD8Q96I13 439 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 NEUROD6Q96NK8 337 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 CD180Q99467 661 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 PKP2Q99959 881 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 FGFBP2Q9BYJ0 223 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 RAD21L1Q9H4I0 556 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 SAYSD1Q9NPB0 183 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 NLRC4Q9NPP4 1024 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 GPR108Q9NPR9 543 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 MARCH4Q9P2E8 410 aaPredicted RBP2.87□□□□□ -1.95
SMC4-220ENST00000488017 PRO0461Q9UI25 63 aa2.87□□□□□ -1.95
SMC4-220ENST00000488017 DUXAA6NLW8 204 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 NCAM2O15394 837 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 CAND2O75155 1236 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 MT-CYBP00156 380 aaPredicted RBP2.86□□□□□ -1.95
SMC4-220ENST00000488017 NR3C1P04150 777 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 IGHV4-38-2P0DP08 117 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 GNALP38405 381 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 PTGER3P43115 390 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 MLLT10P55197 1068 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 CSNK2A1P68400 391 aaPredicted RBP2.86□□□□□ -1.95
SMC4-220ENST00000488017 FOXM1Q08050 763 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 ENPP2Q13822 863 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 TAF11Q15544 211 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 CTU2Q2VPK5 515 aaKnown RBP2.86□□□□□ -1.95
SMC4-220ENST00000488017 FFAR4Q5NUL3 377 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 IL31Q6EBC2 164 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 DOK6Q6PKX4 331 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 SH2D5Q6ZV89 423 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 LRRTM1Q86UE6 522 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 GPAT4Q86UL3 456 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 CSNK2A3Q8NEV1 391 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 SLC38A5Q8WUX1 472 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 HERPUD2Q9BSE4 406 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 WDR12Q9GZL7 423 aaKnown RBP2.86□□□□□ -1.95
SMC4-220ENST00000488017 STN1Q9H668 368 aaKnown RBP2.86□□□□□ -1.95
SMC4-220ENST00000488017 BPIFA1Q9NP55 256 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 KIAA1456Q9P272 454 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 KLK13Q9UKR3 277 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 KCNJ14Q9UNX9 436 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 JRKLQ9Y4A0 524 aa2.86□□□□□ -1.95
SMC4-220ENST00000488017 IGLV7-46A0A075B6I9 117 aa2.85□□□□□ -1.95
SMC4-220ENST00000488017 FAM155BO75949 473 aa2.85□□□□□ -1.95
SMC4-220ENST00000488017 EML2O95834 649 aa2.85□□□□□ -1.95
SMC4-220ENST00000488017 TK1P04183 234 aa2.85□□□□□ -1.95
SMC4-220ENST00000488017 SHMT1P34896 483 aa2.85□□□□□ -1.95
SMC4-220ENST00000488017 CUL4BQ13620 913 aa2.85□□□□□ -1.95
SMC4-220ENST00000488017 VEPH1Q14D04 833 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms