RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CD48P09326 243 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 CHRNB4P30926 498 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 PGM1P36871 562 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 EEF1A1P68104 462 aaKnown RBP3.95□□□□□ -1.78
SMC4-219ENST00000487747 EEF1A1P5Q5VTE0 462 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 SFMBT2Q5VUG0 894 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 FAM53AQ6NSI3 398 aaPredicted RBP3.95□□□□□ -1.78
SMC4-219ENST00000487747 BRAT1Q6PJG6 821 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 NRROSQ86YC3 692 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 APLFQ8IW19 511 aaPredicted RBP3.95□□□□□ -1.78
SMC4-219ENST00000487747 NKAPQ8N5F7 415 aaKnown RBP3.95□□□□□ -1.78
SMC4-219ENST00000487747 STPG4Q8N801 248 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 SLC38A5Q8WUX1 472 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 UPF2Q9HAU5 1272 aaKnown RBP3.95□□□□□ -1.78
SMC4-219ENST00000487747 BEX4Q9NWD9 120 aaPredicted RBP3.95□□□□□ -1.78
SMC4-219ENST00000487747 ERVK-11Q9UQG0 969 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 CEPT1Q9Y6K0 416 aa3.95□□□□□ -1.78
SMC4-219ENST00000487747 SNAP23O00161 211 aa3.94□□□□□ -1.78
SMC4-219ENST00000487747 LDLRAD4O15165 306 aa3.94□□□□□ -1.78
SMC4-219ENST00000487747 PCDH7O60245 1069 aa3.94□□□□□ -1.78
SMC4-219ENST00000487747 UFM1P61960 85 aa3.94□□□□□ -1.78
SMC4-219ENST00000487747 TM9SF4Q92544 642 aa3.94□□□□□ -1.78
SMC4-219ENST00000487747 ZBTB10Q96DT7 871 aa3.94□□□□□ -1.78
SMC4-219ENST00000487747 STAMBPL1Q96FJ0 436 aa3.94□□□□□ -1.78
SMC4-219ENST00000487747 KLHL15Q96M94 604 aa3.94□□□□□ -1.78
SMC4-219ENST00000487747 RIC8AQ9NPQ8 531 aa3.94□□□□□ -1.78
SMC4-219ENST00000487747 MAP3K20Q9NYL2 800 aaKnown RBP3.94□□□□□ -1.78
SMC4-219ENST00000487747 SLC25A10Q9UBX3 287 aaPredicted RBP3.94□□□□□ -1.78
SMC4-219ENST00000487747 CNOT7Q9UIV1 285 aaKnown RBP3.94□□□□□ -1.78
SMC4-219ENST00000487747 A4GNTQ9UNA3 340 aa3.94□□□□□ -1.78
SMC4-219ENST00000487747 SMAD5-AS1Q9Y6J3 95 aa3.94□□□□□ -1.78
SMC4-219ENST00000487747 TEX13CA0A0J9YWL9 993 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 ZCWPW2A0A1B0GU75 182 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 C5orf60A6NFR6 353 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 HHLA1C9JL84 531 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 NR5A2O00482 541 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 VCYO14598 125 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 SYNGR3O43761 229 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 PRKNO60260 465 aaPredicted RBP3.93□□□□□ -1.78
SMC4-219ENST00000487747 CIDEAO60543 219 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 CTSVO60911 334 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 FAM106CPP0CH98 169 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 PRSS56P0CW18 603 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 ERVK-10P10266 1014 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 GNB3P16520 340 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 POLR2CP19387 275 aaPredicted RBP3.93□□□□□ -1.78
SMC4-219ENST00000487747 GGT5P36269 586 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 AMPHP49418 695 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 TERF1P54274 439 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 CSNK2A1P68400 391 aaPredicted RBP3.93□□□□□ -1.78
SMC4-219ENST00000487747 UBE3AQ05086 875 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 GAGE5Q13069 117 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 GAGE6Q13070 117 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 COL28A1Q2UY09 1125 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 SLC9B1Q4ZJI4 515 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 TTI2Q6NXR4 508 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 PQLC2Q6ZP29 291 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 ANO5Q75V66 913 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 SLC46A3Q7Z3Q1 461 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 ADSSL1Q8N142 457 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 CSNK2A3Q8NEV1 391 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 TMEM190Q8WZ59 177 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 HERVK_113Q902F9 699 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 SCRN2Q96FV2 425 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 PPP1R13BQ96KQ4 1090 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 LRR1Q96L50 414 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 QRFPRQ96P65 431 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 NEURL2Q9BR09 285 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 HCN3Q9P1Z3 774 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 SCINQ9Y6U3 715 aa3.93□□□□□ -1.78
SMC4-219ENST00000487747 ZNF821O75541 412 aaPredicted RBP3.92□□□□□ -1.78
SMC4-219ENST00000487747 SEC31AO94979 1220 aaKnown RBP3.92□□□□□ -1.78
SMC4-219ENST00000487747 HOXC13P31276 330 aa3.92□□□□□ -1.78
SMC4-219ENST00000487747 ARCN1P48444 511 aaKnown RBP3.92□□□□□ -1.78
SMC4-219ENST00000487747 TAS2R38P59533 333 aa3.92□□□□□ -1.78
SMC4-219ENST00000487747 COG7P83436 770 aa3.92□□□□□ -1.78
SMC4-219ENST00000487747 FOXM1Q08050 763 aa3.92□□□□□ -1.78
SMC4-219ENST00000487747 ALG11Q2TAA5 492 aa3.92□□□□□ -1.78
SMC4-219ENST00000487747 TMEM35AQ53FP2 167 aa3.92□□□□□ -1.78
SMC4-219ENST00000487747 TRPT1Q86TN4 253 aaKnown RBP3.92□□□□□ -1.78
SMC4-219ENST00000487747 SLC44A1Q8WWI5 657 aa3.92□□□□□ -1.78
SMC4-219ENST00000487747 EGFL8Q99944 293 aa3.92□□□□□ -1.78
SMC4-219ENST00000487747 ACSS1Q9NUB1 689 aaPredicted RBP3.92□□□□□ -1.78
SMC4-219ENST00000487747 TMEM160Q9NX00 188 aa3.92□□□□□ -1.78
SMC4-219ENST00000487747 KLHL20Q9Y2M5 609 aa3.92□□□□□ -1.78
SMC4-219ENST00000487747 GPR52Q9Y2T5 361 aa3.92□□□□□ -1.78
SMC4-219ENST00000487747 A0A087X002 238 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 GAGE10A6NGK3 116 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 EIF3DO15371 548 aaKnown RBP eCLIP3.91□□□□□ -1.782e-16■■■■■ 56.2
SMC4-219ENST00000487747 SPINT2O43291 252 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 IRF1P10914 325 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 GNAQP50148 359 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 CLDN20P56880 219 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 RHBDL3P58872 404 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMC4-219ENST00000487747 SLC1A5Q15758 541 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 TECRLQ5HYJ1 363 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 FRG2Q64ET8 278 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 C18orf63Q68DL7 685 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 RBMS3Q6XE24 437 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms