RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ZNF704Q6ZNC4 412 aaPredicted RBP3.76□□□□□ -1.81
CCDC66-221ENST00000487739 ZNF497Q6ZNH5 498 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 ZCCHC10Q8TBK6 192 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 LINGO1Q96FE5 620 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 ZSCAN31Q96LW9 406 aaPredicted RBP3.76□□□□□ -1.81
CCDC66-221ENST00000487739 TFB2MQ9H5Q4 396 aaKnown RBP3.76□□□□□ -1.81
CCDC66-221ENST00000487739 SCINQ9Y6U3 715 aa3.76□□□□□ -1.81
CCDC66-221ENST00000487739 UTYO14607 1347 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 CTAGE9A4FU28 777 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 SERINC4A6NH21 518 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 TTC36A6NLP5 189 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 PRKNO60260 465 aaPredicted RBP3.75□□□□□ -1.81
CCDC66-221ENST00000487739 TCEA3O75764 348 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 EGFP01133 1207 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 IFIT1P09914 478 aaKnown RBP3.75□□□□□ -1.81
CCDC66-221ENST00000487739 CTAGE8P0CG41 777 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 COX7A2P14406 83 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 NR1D1P20393 614 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 AMPHP49418 695 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 RHBDL3P58872 404 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 TAS2R38P59533 333 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 UFM1P61960 85 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 PQLC2Q6ZP29 291 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 NOL8Q76FK4 1167 aaKnown RBP3.75□□□□□ -1.81
CCDC66-221ENST00000487739 GPR180Q86V85 440 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 CTAGE4Q8IX94 777 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 SRBD1Q8N5C6 995 aaKnown RBP3.75□□□□□ -1.81
CCDC66-221ENST00000487739 STPG4Q8N801 248 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 OR52I2Q8NH67 350 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 THAP6Q8TBB0 222 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 SLC38A5Q8WUX1 472 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 HERVK_113Q902F9 699 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 ANKRD9Q96BM1 317 aaPredicted RBP3.75□□□□□ -1.81
CCDC66-221ENST00000487739 ASCL2Q99929 193 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 LBHD1Q9BQE6 289 aaPredicted RBP3.75□□□□□ -1.81
CCDC66-221ENST00000487739 EIF2AK1Q9BQI3 630 aaKnown RBP3.75□□□□□ -1.81
CCDC66-221ENST00000487739 RIC8AQ9NPQ8 531 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 OGFRQ9NZT2 677 aa3.75□□□□□ -1.81
CCDC66-221ENST00000487739 SLC25A10Q9UBX3 287 aaPredicted RBP3.75□□□□□ -1.81
CCDC66-221ENST00000487739 CAVIN2O95810 425 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 ZNF23P17027 643 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 CHRNB4P30926 498 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 CCR5P51681 352 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 RPL24P83731 157 aaKnown RBP3.74□□□□□ -1.81
CCDC66-221ENST00000487739 PLIN5Q00G26 463 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 SLC1A5Q15758 541 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 USP41Q3LFD5 358 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 WDR38Q5JTN6 314 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 C6orf141Q5SZD1 244 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 SIGIRRQ6IA17 410 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 ZNF280DQ6N043 979 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 OR5R1Q8NH85 324 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 PABPC5Q96DU9 382 aaKnown RBP3.74□□□□□ -1.81
CCDC66-221ENST00000487739 GRAMD2BQ96HH9 432 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 LRR1Q96L50 414 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 KLHL15Q96M94 604 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 MPP6Q9NZW5 540 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 AAR2Q9Y312 384 aaKnown RBP3.74□□□□□ -1.81
CCDC66-221ENST00000487739 CEPT1Q9Y6K0 416 aa3.74□□□□□ -1.81
CCDC66-221ENST00000487739 ZCWPW2A0A1B0GU75 182 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 USP17L23D6RBM5 183 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 VCYO14598 125 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 AHRP35869 848 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 GNAQP50148 359 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 KRTAP10-3P60369 221 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 C15orf39Q6ZRI6 1047 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 CACNA2D4Q7Z3S7 1137 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 HAPLN4Q86UW8 402 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 CPOQ8IVL8 374 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 APLFQ8IW19 511 aaPredicted RBP3.73□□□□□ -1.81
CCDC66-221ENST00000487739 BEST3Q8N1M1 668 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 MAPK1IP1LQ8NDC0 245 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 ACVR1CQ8NER5 493 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 HMGCLL1Q8TB92 370 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 HCAR2Q8TDS4 363 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 TAAR8Q969N4 342 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 KLHL29Q96CT2 875 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 MPHOSPH8Q99549 860 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 FUZQ9BT04 418 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 GLIS2Q9BZE0 524 aaPredicted RBP3.73□□□□□ -1.81
CCDC66-221ENST00000487739 GPR63Q9BZJ6 419 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 SEBOXQ9HB31 216 aaPredicted RBP3.73□□□□□ -1.81
CCDC66-221ENST00000487739 SLC52A3Q9NQ40 469 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 PPP1R14DQ9NXH3 145 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 ACSL5Q9ULC5 683 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 PADI3Q9ULW8 664 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 KLHL20Q9Y2M5 609 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 SMAD5-AS1Q9Y6J3 95 aa3.73□□□□□ -1.81
CCDC66-221ENST00000487739 A0A0G2JLW4 131 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 HHLA1C9JL84 531 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 IFNL4K9M1U5 179 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 TNPO2O14787 897 aaKnown RBP3.72□□□□□ -1.81
CCDC66-221ENST00000487739 EIF3DO15371 548 aaKnown RBP eCLIP3.72□□□□□ -1.81
CCDC66-221ENST00000487739 CDAP32320 146 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 GNB1P62873 340 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 PPFIA1Q13136 1202 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 CAMK1Q14012 370 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 DECR1Q16698 335 aa3.72□□□□□ -1.81
CCDC66-221ENST00000487739 DCST1Q5T197 706 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms