RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 KRTAP3-2Q9BYR7 98 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 CEP44Q9C0F1 390 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 CLPBQ9H078 707 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 BRD8Q9H0E9 1235 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 DHX35Q9H5Z1 703 aaKnown RBP9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 TMEM248Q9NWD8 314 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 PAK5Q9P286 719 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 ACACAQ13085 2346 aa9.43□□□□□ -0.9
TMEM39A-208ENST00000486159 ASXL3Q9C0F0 2248 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 CPED1A4D0V7 1026 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 H7C0C1 242 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 J3KR12 359 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 AREL1O15033 823 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 KDELR3O43731 214 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 AP1G1O43747 822 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 CREB3O43889 395 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 USP12O75317 370 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 CSO75390 466 aaKnown RBP9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 TMCC1O94876 653 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 CSF2P04141 144 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 JUNDP17535 347 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 RGRP47804 291 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 ATP5OP48047 213 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 PFN3P60673 137 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 DYNLT1P63172 113 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 NRG1Q02297 640 aaPredicted RBP9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 SLC20A2Q08357 652 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 ILKQ13418 452 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 POLD3Q15054 466 aaPredicted RBP9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 CA9Q16790 459 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 KIF26BQ2KJY2 2108 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 ZNF805Q5CZA5 627 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 RNASEH2BQ5TBB1 312 aaKnown RBP9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 KIAA1161Q6NSJ0 714 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 CENPUQ71F23 418 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 EFL1Q7Z2Z2 1120 aaKnown RBP9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 TTC7BQ86TV6 843 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 PACS2Q86VP3 889 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 ZSWIM9Q86XI8 627 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 ZNF354CQ86Y25 554 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 SFTPA2Q8IWL1 248 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 SPACA3Q8IXA5 215 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 TP53INP2Q8IXH6 220 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 PQLC3Q8N755 202 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 OR2AP1Q8NGE2 309 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 PCDH19Q8TAB3 1148 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 FGF11Q92914 225 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 TBC1D31Q96DN5 1066 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 PPP1R16AQ96I34 528 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 FCRL3Q96P31 734 aaPredicted RBP9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 SERPINB12Q96P63 405 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 CSPG4P5Q96PW8 444 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 TMEM121Q9BTD3 319 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 EPB41L4BQ9H329 900 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 CPNE5Q9HCH3 593 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 NLGN3Q9NZ94 848 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 LHX3Q9UBR4 397 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 VPS9D1Q9Y2B5 631 aa9.42□□□□□ -0.9
TMEM39A-208ENST00000486159 TTC24A2A3L6 582 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 RASA4BC9J798 803 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 AGRPO00253 132 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 NEMP1O14524 444 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 FPGTO14772 594 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 MTSS1O43312 755 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 AQP9O43315 295 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 RASA4O43374 803 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 RAMP2O60895 175 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 STK10O94804 968 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 GSRP00390 522 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 AGTP01019 485 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 IFNB1P01574 187 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 NME1P15531 152 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 PECAM1P16284 738 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 RPL22P35268 128 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 MAGEA6P43360 314 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 MAPKAPK2P49137 400 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 ARL4CP56559 192 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 CXADRP78310 365 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 GABREP78334 506 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 E2F1Q01094 437 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 TLE3Q04726 772 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 MMRN1Q13201 1228 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 SGCGQ13326 291 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 SLC29A2Q14542 456 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 PAFAH1B3Q15102 231 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 RASA2Q15283 850 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 TRIP13Q15645 432 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 TBC1D25Q3MII6 688 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 KRT71Q3SY84 523 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 TTMPQ5BVD1 217 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 PRRT3Q5FWE3 981 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 PPP6R3Q5H9R7 873 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 GDPD4Q6W3E5 623 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 LRRC69Q6ZNQ3 347 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 PARGQ86W56 976 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 SLC35F3Q8IY50 421 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 RIBC1Q8N443 379 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 FAM181AQ8N9Y4 354 aa9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 TP53I13Q8NBR0 393 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-208ENST00000486159 SNIP1Q8TAD8 396 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms