RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 SLC25A51Q9H1U9 297 aa17.04■□□□□ 0.32
VIM-205ENST00000485947 FZD3Q9NPG1 666 aa17.04■□□□□ 0.32
VIM-205ENST00000485947 KCTD5Q9NXV2 234 aa17.04■□□□□ 0.32
VIM-205ENST00000485947 NCKIPSDQ9NZQ3 722 aa17.04■□□□□ 0.32
VIM-205ENST00000485947 DKK4Q9UBT3 224 aa17.04■□□□□ 0.32
VIM-205ENST00000485947 GCN1Q92616 2671 aaKnown RBP17.04■□□□□ 0.32
VIM-205ENST00000485947 POM121BA6NF01 834 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 RFPL3O75679 317 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 APRTP07741 180 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 FAM153BP0C7A2 387 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 CES1P23141 567 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 ACP1P24666 158 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 LMAN1P49257 510 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 ACADVLP49748 655 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 ARL4CP56559 192 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 CLDN2P57739 230 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 E2F1Q01094 437 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 BCL2L1Q07817 233 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 SLC14A2Q15849 920 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 FAM153CQ494X1 144 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 ANKRD22Q5VYY1 191 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 SLC22A18ASQ8N1D0 253 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 SLC25A45Q8N413 288 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 MREGQ8N565 214 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 TAB3Q8N5C8 712 aaPredicted RBP17.03■□□□□ 0.32
VIM-205ENST00000485947 FAM181AQ8N9Y4 354 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 TSEN2Q8NCE0 465 aaKnown RBP17.03■□□□□ 0.32
VIM-205ENST00000485947 MYOCQ99972 504 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 MGME1Q9BQP7 344 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 NT5MQ9NPB1 228 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 NLGN3Q9NZ94 848 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 FAM153AQ9UHL3 310 aa17.03■□□□□ 0.32
VIM-205ENST00000485947 TCRBV7S3A2A0A539 114 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 AP3B1O00203 1094 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 SCAMP1O15126 338 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 RAD51BO15315 384 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 INSIG1O15503 277 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 SOCS5O75159 536 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 SUN1O94901 812 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 AP2A1O95782 977 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 MLNP12872 115 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 HNF1BP35680 557 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 THOP1P52888 689 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 MPP3Q13368 585 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 FZD2Q14332 565 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 HIF1AQ16665 826 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 PROX2Q3B8N5 592 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 KCTD11Q693B1 232 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 CENPUQ71F23 418 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 TMC3Q7Z5M5 1100 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 RELL1Q8IUW5 271 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 PDIK1LQ8N165 341 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 EXOC2Q96KP1 924 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 GORASP1Q9BQQ3 440 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 LRRC40Q9H9A6 602 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 XAB2Q9HCS7 855 aaKnown RBP17.02■□□□□ 0.32
VIM-205ENST00000485947 DNAJC28Q9NX36 388 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 ITM2BQ9Y287 266 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 TTLL3Q9Y4R7 772 aa17.02■□□□□ 0.32
VIM-205ENST00000485947 SMG1Q96Q15 3661 aaKnown RBP17.01■□□□□ 0.31
VIM-205ENST00000485947 LOC400499M0QZD8 3231 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 SRRM3A6NNA2 597 aaPredicted RBP17.01■□□□□ 0.31
VIM-205ENST00000485947 E7ESA3 106 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 TPP1O14773 563 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 MMP20O60882 483 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 PIGNO95427 931 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 MMP12P39900 470 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 TNNT3P45378 269 aaPredicted RBP17.01■□□□□ 0.31
VIM-205ENST00000485947 BLKP51451 505 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 DUSP3P51452 185 aaPredicted RBP17.01■□□□□ 0.31
VIM-205ENST00000485947 PDE1CQ14123 709 aaPredicted RBP17.01■□□□□ 0.31
VIM-205ENST00000485947 LRRC14Q15048 493 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 LINC00523Q86TU6 105 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 CAMK1DQ8IU85 385 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 SDR16C5Q8N3Y7 309 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 PDCD7Q8N8D1 485 aaKnown RBP17.01■□□□□ 0.31
VIM-205ENST00000485947 ZCCHC14Q8WYQ9 949 aaKnown RBP17.01■□□□□ 0.31
VIM-205ENST00000485947 IMP4Q96G21 291 aaKnown RBP17.01■□□□□ 0.31
VIM-205ENST00000485947 MLPHQ9BV36 600 aaPredicted RBP17.01■□□□□ 0.31
VIM-205ENST00000485947 TXLNGYQ9BZA5 131 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 PCDH12Q9NPG4 1184 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 GGT7Q9UJ14 662 aa17.01■□□□□ 0.31
VIM-205ENST00000485947 TRAFD1O14545 582 aaPredicted RBP17■□□□□ 0.31
VIM-205ENST00000485947 SIGLEC6O43699 453 aa17■□□□□ 0.31
VIM-205ENST00000485947 CAPNS1P04632 268 aa17■□□□□ 0.31
VIM-205ENST00000485947 GP1BAP07359 652 aa17■□□□□ 0.31
VIM-205ENST00000485947 CR2P20023 1033 aa17■□□□□ 0.31
VIM-205ENST00000485947 SCNN1BP51168 640 aa17■□□□□ 0.31
VIM-205ENST00000485947 DHX9Q08211 1270 aaKnown RBP17■□□□□ 0.31
VIM-205ENST00000485947 ITKQ08881 620 aa17■□□□□ 0.31
VIM-205ENST00000485947 DNAJC21Q5F1R6 531 aaKnown RBP17■□□□□ 0.31
VIM-205ENST00000485947 LRRC8BQ6P9F7 803 aa17■□□□□ 0.31
VIM-205ENST00000485947 MACC1Q6ZN28 852 aa17■□□□□ 0.31
VIM-205ENST00000485947 PGBD5Q8N414 524 aa17■□□□□ 0.31
VIM-205ENST00000485947 TP53I13Q8NBR0 393 aaPredicted RBP17■□□□□ 0.31
VIM-205ENST00000485947 ARRDC2Q8TBH0 407 aa17■□□□□ 0.31
VIM-205ENST00000485947 TADA1Q96BN2 335 aa17■□□□□ 0.31
VIM-205ENST00000485947 LRRC39Q96DD0 335 aa17■□□□□ 0.31
VIM-205ENST00000485947 OXNAD1Q96HP4 312 aaPredicted RBP17■□□□□ 0.31
VIM-205ENST00000485947 SERPINB12Q96P63 405 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms