RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PPARDQ03181 441 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 CDH17Q12864 832 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 SLC14A1Q13336 389 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 PTPRCAPQ14761 206 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 PPP1R7Q15435 360 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 TAF1AQ15573 450 aaPredicted RBP11.78□□□□□ -0.52
HPS4-214ENST00000485842 ALG11Q2TAA5 492 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 KCTD16Q68DU8 428 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 FAM151BQ6UXP7 276 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 ADAMTSL4Q6UY14 1074 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 TRAM1L1Q8N609 369 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 DEFB124Q8NES8 71 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 OR4K2Q8NGD2 314 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 OR56A4Q8NGH8 313 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 OR13C4Q8NGS5 318 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 SAP25Q8TEE9 199 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 OR1E3Q8WZA6 343 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 ZNF592Q92610 1267 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 PDXPQ96GD0 296 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 TEX101Q9BY14 249 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 SLC13A1Q9BZW2 595 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 CDH19Q9H159 772 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 FGF22Q9HCT0 170 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 MRPL40Q9NQ50 206 aaKnown RBP11.78□□□□□ -0.52
HPS4-214ENST00000485842 EIF2B3Q9NR50 452 aaKnown RBP11.78□□□□□ -0.52
HPS4-214ENST00000485842 UCKL1Q9NWZ5 548 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 IL17CQ9P0M4 197 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 NFKBIL1Q9UBC1 381 aaPredicted RBP11.78□□□□□ -0.52
HPS4-214ENST00000485842 KLF15Q9UIH9 416 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 BTBD3Q9Y2F9 522 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 PCDHGB2Q9Y5G2 931 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 ZNF106Q9H2Y7 1883 aaKnown RBP11.77□□□□□ -0.53
HPS4-214ENST00000485842 FFAR2O15552 330 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 FLRT2O43155 660 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 PCDHGA12O60330 932 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 SUN1O94901 812 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 RASGRP1O95267 797 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 ASMTLO95671 621 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 HOXC4P09017 264 aaPredicted RBP11.77□□□□□ -0.53
HPS4-214ENST00000485842 DGKAP23743 735 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 ID4P47928 161 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 MSLNQ13421 630 aaPredicted RBP11.77□□□□□ -0.53
HPS4-214ENST00000485842 INAVAQ3KP66 663 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 CERCAMQ5T4B2 595 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 NLRP8Q86W28 1048 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 ZNF548Q8NEK5 533 aaPredicted RBP11.77□□□□□ -0.53
HPS4-214ENST00000485842 BRSK1Q8TDC3 778 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 LMX1AQ8TE12 382 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 BTN2A2Q8WVV5 523 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 HIC2Q96JB3 615 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 CAMK1GQ96NX5 476 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 PLEKHG4BQ96PX9 1271 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 ZSCAN5AQ9BUG6 496 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 LRRC61Q9BV99 259 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 FRMD8Q9BZ67 464 aaPredicted RBP11.77□□□□□ -0.53
HPS4-214ENST00000485842 SLC32A1Q9H598 525 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 CYP4F12Q9HCS2 524 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 ARFGAP3Q9NP61 516 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 DLL3Q9NYJ7 618 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 RNF14Q9UBS8 474 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 ASIC3Q9UHC3 531 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 FKBPLQ9UIM3 349 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 TMEM98Q9Y2Y6 226 aa11.77□□□□□ -0.53
HPS4-214ENST00000485842 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.76□□□□□ -0.53
HPS4-214ENST00000485842 GLYATL1P3A0A0U1RQE8 302 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 PRSS38A1L453 326 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 CCDC188H7C350 402 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 CCL22O00626 93 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 GPR39O43194 453 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 AQP9O43315 295 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 PPFIA2O75334 1257 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 TNFP01375 233 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 CTSEP14091 401 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 TPSB2P20231 275 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 GRK6P43250 576 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 GNPDA1P46926 289 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 POLD2P49005 469 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 BLKP51451 505 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 NOVA1P51513 510 aaKnown RBP11.76□□□□□ -0.53
HPS4-214ENST00000485842 ZNF140P52738 457 aaPredicted RBP11.76□□□□□ -0.53
HPS4-214ENST00000485842 HK3P52790 923 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 SESN2P58004 480 aaPredicted RBP11.76□□□□□ -0.53
HPS4-214ENST00000485842 PDE1BQ01064 536 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 DR1Q01658 176 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 C2orf54Q08AI8 447 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 C1orf61Q13536 156 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 KCNJ11Q14654 390 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 PUM1Q14671 1186 aaKnown RBP eCLIP11.76□□□□□ -0.53
HPS4-214ENST00000485842 TPSAB1Q15661 275 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 CHRNA6Q15825 494 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 CCDC38Q502W7 563 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 PRRT3Q5FWE3 981 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 ANKRD22Q5VYY1 191 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 MARK2Q7KZI7 788 aaKnown RBP11.76□□□□□ -0.53
HPS4-214ENST00000485842 PIP4P1Q86T03 277 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 PHYKPLQ8IUZ5 450 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 EID2Q8N6I1 236 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 GDAP1Q8TB36 358 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 RHBDD1Q8TEB9 315 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 PTCD2Q8WV60 388 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms