RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 EXD1Q8NHP7 514 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 CTNNBL1Q8WYA6 563 aaPredicted RBP17.06■□□□□ 0.32
SMC4-216ENST00000485645 NUDT22Q9BRQ3 303 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 SEMA4CQ9C0C4 833 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 LCMT1Q9UIC8 334 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 NENFQ9UMX5 172 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 PLEKHM1Q9Y4G2 1056 aa17.06■□□□□ 0.32
SMC4-216ENST00000485645 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMC4-216ENST00000485645 HGSO14964 777 aaPredicted RBP17.05■□□□□ 0.32
SMC4-216ENST00000485645 PPM1DO15297 605 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 CLDN7O95471 211 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 ASMTLO95671 621 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 PRLP01236 227 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 HLA-DQB2P05538 268 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 CD1CP29017 333 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 TAS2R40P59535 323 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 RPL26P61254 145 aaKnown RBP17.05■□□□□ 0.32
SMC4-216ENST00000485645 C16orf72Q14CZ0 275 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 PYCR3Q53H96 274 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 ZNF574Q6ZN55 896 aaPredicted RBP17.05■□□□□ 0.32
SMC4-216ENST00000485645 MARK2Q7KZI7 788 aaKnown RBP17.05■□□□□ 0.32
SMC4-216ENST00000485645 TRIM74Q86UV6 250 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 GALNT13Q8IUC8 556 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 RAVER1Q8IY67 606 aaKnown RBP17.05■□□□□ 0.32
SMC4-216ENST00000485645 PQLC3Q8N755 202 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 CCNYQ8ND76 341 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 LPCAT1Q8NF37 534 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 ARRDC2Q8TBH0 407 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 FAF2Q96CS3 445 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 AGAP2Q99490 1192 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 RIOK2Q9BVS4 552 aaKnown RBP17.05■□□□□ 0.32
SMC4-216ENST00000485645 B3GNT4Q9C0J1 378 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 PCDH9Q9HC56 1237 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 RPL26L1Q9UNX3 145 aaKnown RBP17.05■□□□□ 0.32
SMC4-216ENST00000485645 PCDHB11Q9Y5F2 797 aa17.05■□□□□ 0.32
SMC4-216ENST00000485645 IGHV5-10-1A0A0J9YXX1 117 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 C9orf172C9J069 976 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 INPP4BO15327 924 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 TPM3P06753 285 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 CD82P27701 267 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 HNRNPH3P31942 346 aaKnown RBP17.04■□□□□ 0.32
SMC4-216ENST00000485645 GBE1Q04446 702 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 NIPAL4Q0D2K0 466 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 LRP8Q14114 963 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 SLC18A3Q16572 532 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 MANEAQ5SRI9 462 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 ZFAND4Q86XD8 727 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 CCDC13Q8IYE1 715 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 RCBTB1Q8NDN9 531 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 LRRN4Q8WUT4 740 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 HDAC11Q96DB2 347 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 MED8Q96G25 268 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 COX14Q96I36 57 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 ZNF830Q96NB3 372 aaPredicted RBP17.04■□□□□ 0.32
SMC4-216ENST00000485645 LYSMD1Q96S90 227 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 PACSIN1Q9BY11 444 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 KCNK4Q9NYG8 393 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 FOXJ2Q9P0K8 574 aa17.04■□□□□ 0.32
SMC4-216ENST00000485645 C1orf232A0A0U1RR37 186 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 JCHAINP01591 159 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 CCL4P13236 92 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 KDELR1P24390 212 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 MAN1A1P33908 653 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 LIMK2P53671 638 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 SLC10A2Q12908 348 aaPredicted RBP17.03■□□□□ 0.32
SMC4-216ENST00000485645 SRSF6Q13247 344 aaKnown RBP17.03■□□□□ 0.32
SMC4-216ENST00000485645 SQSTM1Q13501 440 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 TRA2AQ13595 282 aaKnown RBP eCLIP17.03■□□□□ 0.32
SMC4-216ENST00000485645 NKAIN2Q5VXU1 208 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 OR4D9Q8NGE8 314 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 CCHCR1Q8TD31 782 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 SGF29Q96ES7 293 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 CCDC74BQ96LY2 380 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 DPYSL5Q9BPU6 564 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 XPO4Q9C0E2 1151 aaKnown RBP17.03■□□□□ 0.32
SMC4-216ENST00000485645 DTLQ9NZJ0 730 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 ZNHIT2Q9UHR6 403 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 PIEZO2Q9H5I5 2752 aa17.03■□□□□ 0.32
SMC4-216ENST00000485645 ZFC3H1O60293 1989 aaKnown RBP17.02■□□□□ 0.32
SMC4-216ENST00000485645 IGHV1OR21-1A0A087WYE8 117 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 ANKRD66B4E2M5 251 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 CD86P42081 329 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 GPLD1P80108 840 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 MESDQ14696 234 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 DTX1Q86Y01 620 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 ZSCAN1Q8NBB4 408 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 RAPGEF5Q92565 580 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 RNF157Q96PX1 679 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 TAAR9Q96RI9 348 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 MLPHQ9BV36 600 aaPredicted RBP17.02■□□□□ 0.32
SMC4-216ENST00000485645 DEF6Q9H4E7 631 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 PKD2L2Q9NZM6 624 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 VPS18Q9P253 973 aa17.02■□□□□ 0.32
SMC4-216ENST00000485645 TRBV23OR9-2A0A075B6M9 112 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 B8ZZF3 427 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.01■□□□□ 0.31
SMC4-216ENST00000485645 KCNK1O00180 336 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 DNAJC6O75061 913 aa17.01■□□□□ 0.31
SMC4-216ENST00000485645 ZIC2O95409 532 aaPredicted RBP17.01■□□□□ 0.31
SMC4-216ENST00000485645 ATP1A1P05023 1023 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms