RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 APOL2Q9BQE5 337 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 NAT9Q9BTE0 207 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 APOOQ9BUR5 198 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 SPATA16Q9BXB7 569 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 SLC13A1Q9BZW2 595 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 TSPYL1Q9H0U9 437 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 RMI1Q9H9A7 625 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 CAPN10Q9HC96 672 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 TMEM9BQ9NQ34 198 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.24□□□□□ -1.09
SF3A1-208ENST00000485618 NFKBIL1Q9UBC1 381 aaPredicted RBP8.24□□□□□ -1.09
SF3A1-208ENST00000485618 GGT7Q9UJ14 662 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 ANAPC5Q9UJX4 755 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 COQ6Q9Y2Z9 468 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 CEP192Q8TEP8 1941 aa8.24□□□□□ -1.09
SF3A1-208ENST00000485618 GLYATL1P3A0A0U1RQE8 302 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SPTY2D1-AS1A0A0U1RR47 76 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 A0A1W2PR77 199 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 POM121BA6NF01 834 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 GOLGA8CPA6NN73 597 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 EFCAB8A8MWE9 144 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 CFAP99D6REC4 459 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SPINT1O43278 529 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 USP12O75317 370 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SLC25A14O95258 325 aaPredicted RBP8.23□□□□□ -1.09
SF3A1-208ENST00000485618 RASGRP1O95267 797 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 TNFP01375 233 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 PIRTP0C851 137 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 ALPPL2P10696 532 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 MYCLP1P12525 358 aaPredicted RBP8.23□□□□□ -1.09
SF3A1-208ENST00000485618 CTSEP14091 401 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SPINK2P20155 84 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 ITGALP20701 1170 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 TRIM23P36406 574 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 MAGEA6P43360 314 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 CHRNA4P43681 627 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 RXRGP48443 463 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 CCT8P50990 548 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 CLDN2P57739 230 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SESN2P58004 480 aaPredicted RBP8.23□□□□□ -1.09
SF3A1-208ENST00000485618 KIAA1024LP59773 190 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 PFN3P60673 137 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 PPARDQ03181 441 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 GRIK2Q13002 908 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 GTF2H3Q13889 308 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SEPT6Q14141 434 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 FGL2Q14314 439 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SPARCL1Q14515 664 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 IHHQ14623 411 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 POU6F1Q14863 301 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 ELOCQ15369 112 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 CDKN3Q16667 212 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 KIF19Q2TAC6 998 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 HLA-BQ31612 363 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 GPR33Q49SQ1 333 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 PCID2Q5JVF3 399 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 CASC4Q6P4E1 433 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 MACC1Q6ZN28 852 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 GCNT7Q6ZNI0 430 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 ZNF572Q7Z3I7 529 aaPredicted RBP8.23□□□□□ -1.09
SF3A1-208ENST00000485618 PARGQ86W56 976 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 JAMLQ86YT9 394 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 PHYKPLQ8IUZ5 450 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 CCNJLQ8IV13 435 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 PDIK1LQ8N165 341 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 OR52K1Q8NGK4 314 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 GDAP1Q8TB36 358 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 GLMNQ92990 594 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 ULK4Q96C45 1275 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 DCUN1D1Q96GG9 259 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SNF8Q96H20 258 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 BMFQ96LC9 184 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 TBATAQ96M53 351 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 WDR92Q96MX6 357 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 RANBP9Q96S59 729 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 ELF4Q99607 663 aaPredicted RBP8.23□□□□□ -1.09
SF3A1-208ENST00000485618 ORAI3Q9BRQ5 295 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 ERP44Q9BS26 406 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 RIOK2Q9BVS4 552 aaKnown RBP8.23□□□□□ -1.09
SF3A1-208ENST00000485618 TEX101Q9BY14 249 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 ABCG8Q9H221 673 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 GAREM1Q9H706 876 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 FZD3Q9NPG1 666 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 CASS4Q9NQ75 786 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SMARCAL1Q9NZC9 954 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 NCKIPSDQ9NZQ3 722 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 IL17CQ9P0M4 197 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SPASTQ9UBP0 616 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 RIMKLBQ9ULI2 386 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 ZMIZ1Q9ULJ6 1067 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 DOLKQ9UPQ8 538 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 PCDHGB2Q9Y5G2 931 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SNX11Q9Y5W9 270 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 MRFAP1Q9Y605 127 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 SLC30A1Q9Y6M5 507 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 ATXN2Q99700 1313 aaKnown RBP8.23□□□□□ -1.09
SF3A1-208ENST00000485618 LAMA1P25391 3075 aa8.23□□□□□ -1.09
SF3A1-208ENST00000485618 KLHL33A6NCF5 533 aa8.22□□□□□ -1.09
SF3A1-208ENST00000485618 ESPNB1AK53 854 aa8.22□□□□□ -1.09
SF3A1-208ENST00000485618 PATE3B3GLJ2 98 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms