RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 ALKBH5Q6P6C2 394 aaKnown RBP10.55□□□□□ -0.72
HMGN1-215ENST00000485550 BORAQ6PGQ7 559 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 DOK6Q6PKX4 331 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 TMPRSS9Q7Z410 1059 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 HEATR4Q86WZ0 1026 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 ANKK1Q8NFD2 765 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 OR6C4Q8NGE1 309 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 TEKT4Q8WW24 435 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 DTD2Q96FN9 168 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 SCRN2Q96FV2 425 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 TMEM74Q96NL1 305 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 MGME1Q9BQP7 344 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 ADNPQ9H2P0 1102 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 LRRC4CQ9HCJ2 640 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 PHPT1Q9NRX4 125 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-215ENST00000485550 SUFUQ9UMX1 484 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 PLEKHM1Q9Y4G2 1056 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 TTLL3Q9Y4R7 772 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 PCDHB11Q9Y5F2 797 aa10.55□□□□□ -0.72
HMGN1-215ENST00000485550 A0A1W2PQ67 120 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 A0A1W2PQJ5 194 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 C9orf172C9J069 976 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 B4GAT1O43505 415 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 MFSD11O43934 449 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 MYCLP1P12525 358 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-215ENST00000485550 CCNB1P14635 433 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 ALDH4A1P30038 563 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 CASRP41180 1078 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 GPR1P46091 355 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 POLE2P56282 527 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 OR1D5P58170 312 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 ZBED6P86452 979 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 CDK3Q00526 305 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 HADHQ16836 314 aaKnown RBP10.54□□□□□ -0.72
HMGN1-215ENST00000485550 CERCAMQ5T4B2 595 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 SLC30A9Q6PML9 568 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 USP45Q70EL2 814 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 MARK2Q7KZI7 788 aaKnown RBP10.54□□□□□ -0.72
HMGN1-215ENST00000485550 SPRED1Q7Z699 444 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 DTX1Q86Y01 620 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 NRROSQ86YC3 692 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 CBARPQ8N350 705 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-215ENST00000485550 NIPA2Q8N8Q9 360 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 KCTD6Q8NC69 237 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 ZDHHC1Q8WTX9 485 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 PIH1D2Q8WWB5 315 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 PATE1Q8WXA2 126 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 SYN2Q92777 582 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-215ENST00000485550 SCAMP4Q969E2 229 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 SLC12A9Q9BXP2 914 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 TEX101Q9BY14 249 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 ABCG8Q9H221 673 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 RDH14Q9HBH5 336 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 ZNF71Q9NQZ8 489 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-215ENST00000485550 KCNK4Q9NYG8 393 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 IFNKQ9P0W0 207 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 CTTNBP2NLQ9P2B4 639 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 APPL1Q9UKG1 709 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 CAPN11Q9UMQ6 739 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 PLAAQ9Y263 795 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 TMEM98Q9Y2Y6 226 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 LUC7L2Q9Y383 392 aaKnown RBP10.54□□□□□ -0.72
HMGN1-215ENST00000485550 ST14Q9Y5Y6 855 aa10.54□□□□□ -0.72
HMGN1-215ENST00000485550 TNRC6AQ8NDV7 1962 aaKnown RBP10.54□□□□□ -0.72
HMGN1-215ENST00000485550 TRBV23OR9-2A0A075B6M9 112 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 RHPN2P1A8MT19 583 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 GOLGA6L19H0YKK7 550 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 ECEL1O95672 775 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 GYPCP04921 128 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 FGF1P05230 155 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 NFKBIAP25963 317 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 CASP14P31944 242 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 ADCY8P40145 1251 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 GARSP41250 739 aaKnown RBP10.53□□□□□ -0.72
HMGN1-215ENST00000485550 ARSEP51690 589 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 EPHB1P54762 984 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 TAS2R40P59535 323 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 B4GALNT1Q00973 533 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 CTBSQ01459 385 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 DSC2Q02487 901 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 ILF3Q12906 894 aaKnown RBP eCLIP10.53□□□□□ -0.72
HMGN1-215ENST00000485550 BIRC2Q13490 618 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 DPYSL3Q14195 570 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 IHHQ14623 411 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
HMGN1-215ENST00000485550 ZFYVE27Q5T4F4 411 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 PHF19Q5T6S3 580 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 LRRC66Q68CR7 880 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 NCBP2-AS2Q69YL0 99 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 TECPR1Q7Z6L1 1165 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 TRIM74Q86UV6 250 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 KIAA1524Q8TCG1 905 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 GPBAR1Q8TDU6 330 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 AP2M1Q96CW1 435 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 AGAP2Q99490 1192 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 PACSIN1Q9BY11 444 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 GSDMCQ9BYG8 508 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 FRMD8Q9BZ67 464 aaPredicted RBP10.53□□□□□ -0.72
HMGN1-215ENST00000485550 SEMA6CQ9H3T2 930 aa10.53□□□□□ -0.72
HMGN1-215ENST00000485550 RBM22Q9NW64 420 aaKnown RBP eCLIP10.53□□□□□ -0.723e-6■■□□□ 13.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms