RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 CFC1P0CG37 223 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 S1PR1P21453 382 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 MARK3P27448 753 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 NAP1L1P55209 391 aaKnown RBP4.04□□□□□ -1.76
SMC4-215ENST00000484799 HNRNPH2P55795 449 aaKnown RBP4.04□□□□□ -1.76
SMC4-215ENST00000484799 RPP30P78346 268 aaKnown RBP4.04□□□□□ -1.76
SMC4-215ENST00000484799 CAMK1Q14012 370 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 SGO1Q5FBB7 561 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 ZNF766Q5HY98 468 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 DUS1LQ6P1R4 473 aaKnown RBP4.04□□□□□ -1.76
SMC4-215ENST00000484799 SLC27A1Q6PCB7 646 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 GFRALQ6UXV0 394 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 CEACAM20Q6UY09 585 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 ZNF852Q6ZMS4 543 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 TMEM219Q86XT9 240 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 DHX40Q8IX18 779 aaKnown RBP4.04□□□□□ -1.76
SMC4-215ENST00000484799 PLD5Q8N7P1 536 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 SLC24A4Q8NFF2 622 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 SPATA22Q8NHS9 363 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 DUSP19Q8WTR2 217 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 SNRNP27Q8WVK2 155 aaKnown RBP4.04□□□□□ -1.76
SMC4-215ENST00000484799 STAMBPL1Q96FJ0 436 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 QRFPRQ96P65 431 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 HEMGNQ9BXL5 484 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 IFIH1Q9BYX4 1025 aaKnown RBP4.04□□□□□ -1.76
SMC4-215ENST00000484799 CSTL1Q9H114 145 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 PPP1R3EQ9H7J1 279 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 C20orf141Q9NUB4 165 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 TMEM30AQ9NV96 361 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 IRAK4Q9NWZ3 460 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 TMEM160Q9NX00 188 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 TINAGQ9UJW2 476 aa4.04□□□□□ -1.76
SMC4-215ENST00000484799 GAGE10A6NGK3 116 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 LRRC53A6NM62 1247 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 PMS2P5A8MQ11 134 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 PCDH7O60245 1069 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 CD4P01730 458 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 EDN2P20800 178 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 CAPN3P20807 821 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 PAFAH1B1P43034 410 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 EFNA5P52803 228 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 CLNS1AP54105 237 aaKnown RBP4.03□□□□□ -1.76
SMC4-215ENST00000484799 LINC01547P58512 204 aaPredicted RBP4.03□□□□□ -1.76
SMC4-215ENST00000484799 UFM1P61960 85 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 CSNK2A1P68400 391 aaPredicted RBP4.03□□□□□ -1.76
SMC4-215ENST00000484799 SLC35E4Q6ICL7 350 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 FAM180BQ6P0A1 224 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 GPR180Q86V85 440 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 CHERPQ8IWX8 916 aaKnown RBP4.03□□□□□ -1.76
SMC4-215ENST00000484799 CSNK2A3Q8NEV1 391 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 OR10V1Q8NGI7 309 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 DNAAF4Q8WXU2 420 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 RFFLQ8WZ73 363 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 HTRA1Q92743 480 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 ORAI1Q96D31 301 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 HVCN1Q96D96 273 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 ZBTB10Q96DT7 871 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 ELP4Q96EB1 424 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 ZNF354BQ96LW1 612 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 HARBI1Q96MB7 349 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 NEUROD6Q96NK8 337 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 F2RL3Q96RI0 385 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 NEURL2Q9BR09 285 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 PREBQ9HCU5 417 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 SMC4Q9NTJ3 1288 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 TBC1D22BQ9NU19 505 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 PPP1R14DQ9NXH3 145 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 HSF4Q9ULV5 492 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 A4GNTQ9UNA3 340 aa4.03□□□□□ -1.76
SMC4-215ENST00000484799 AAR2Q9Y312 384 aaKnown RBP4.03□□□□□ -1.76
SMC4-215ENST00000484799 IGKV3D-15A0A087WSY6 115 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 A0A087X0M5 115 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 A0A1B0GX30 115 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 TNPO2O14787 897 aaKnown RBP4.02□□□□□ -1.77
SMC4-215ENST00000484799 HLA-DOBP13765 273 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 MYOD1P15172 320 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 ITGA2P17301 1181 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 POLR2CP19387 275 aaPredicted RBP4.02□□□□□ -1.77
SMC4-215ENST00000484799 MAOAP21397 527 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 SHMT1P34896 483 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 MMP14P50281 582 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 TUBP50607 506 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 CCR5P51681 352 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 ISL1P61371 349 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 RNPS1Q15287 305 aaKnown RBP4.02□□□□□ -1.77
SMC4-215ENST00000484799 GPR68Q15743 365 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 C2orf68Q2NKX9 166 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 CCNYL2Q5T2Q4 361 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 SFMBT2Q5VUG0 894 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 ANKRD54Q6NXT1 300 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 BRINP3Q76B58 766 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 SLC35F3Q8IY50 421 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 ZNF485Q8NCK3 441 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 PIGTQ969N2 578 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 KLHL15Q96M94 604 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 GPR63Q9BZJ6 419 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 ESRP2Q9H6T0 727 aaKnown RBP4.02□□□□□ -1.77
SMC4-215ENST00000484799 DDX4Q9NQI0 724 aaKnown RBP4.02□□□□□ -1.77
SMC4-215ENST00000484799 KLHL1Q9NR64 748 aa4.02□□□□□ -1.77
SMC4-215ENST00000484799 TBX20Q9UMR3 447 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms