RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 PROX2Q3B8N5 592 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 ZNF542PQ5EBM4 170 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 KCTD16Q68DU8 428 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 LVRNQ6Q4G3 990 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 GLT6D1Q7Z4J2 308 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 CCDC89Q8N998 374 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 GPR26Q8NDV2 337 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 BRSK1Q8TDC3 778 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 HIC2Q96JB3 615 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 AGAP2Q99490 1192 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 TCEAL2Q9H3H9 227 aaPredicted RBP15.8■□□□□ 0.12
UPF3A-208ENST00000484246 EIF2B3Q9NR50 452 aaKnown RBP15.8■□□□□ 0.12
UPF3A-208ENST00000484246 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.8■□□□□ 0.12
UPF3A-208ENST00000484246 VPS18Q9P253 973 aa15.8■□□□□ 0.12
UPF3A-208ENST00000484246 CNOT6Q9ULM6 557 aaKnown RBP15.8■□□□□ 0.12
UPF3A-208ENST00000484246 GOLGA8CPA6NN73 597 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 TRIM38O00635 465 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 CEACAM5P06731 702 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 ADRB1P08588 477 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 GNG11P61952 73 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 SIM1P81133 766 aaPredicted RBP15.79■□□□□ 0.12
UPF3A-208ENST00000484246 PRRT3Q5FWE3 981 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 FAXCQ5TGI0 409 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 LINC00523Q86TU6 105 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 HID1Q8IV36 788 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 EID2Q8N6I1 236 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 GLIS1Q8NBF1 620 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 BLOC1S5Q8TDH9 187 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 TSACCQ96A04 125 aaPredicted RBP15.79■□□□□ 0.12
UPF3A-208ENST00000484246 MS4A14Q96JA4 679 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 VPS35Q96QK1 796 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 CAAP1Q9H8G2 361 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 ETNK1Q9HBU6 452 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 TRNAU1APQ9NX07 287 aaKnown RBP15.79■□□□□ 0.12
UPF3A-208ENST00000484246 TOR4AQ9NXH8 423 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 NCKIPSDQ9NZQ3 722 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 PCDHGA1Q9Y5H4 931 aa15.79■□□□□ 0.12
UPF3A-208ENST00000484246 LRRK1Q38SD2 2015 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 KNL1Q8NG31 2342 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.78■□□□□ 0.12
UPF3A-208ENST00000484246 SPAARA0A1B0GVQ0 90 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 GPR89AB7ZAQ6 455 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 LDOC1O95751 146 aaPredicted RBP15.78■□□□□ 0.12
UPF3A-208ENST00000484246 TNFP01375 233 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 GPR89BP0CG08 455 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 PSMA3P25788 255 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 RPL22P35268 128 aaKnown RBP15.78■□□□□ 0.12
UPF3A-208ENST00000484246 FNTAP49354 379 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 PDE1BQ01064 536 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 OLIG2Q13516 323 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 ELOCQ15369 112 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 N4BP2L1Q5TBK1 243 aaPredicted RBP15.78■□□□□ 0.12
UPF3A-208ENST00000484246 ZCCHC8Q6NZY4 707 aaKnown RBP15.78■□□□□ 0.12
UPF3A-208ENST00000484246 PDCD7Q8N8D1 485 aaKnown RBP15.78■□□□□ 0.12
UPF3A-208ENST00000484246 LMX1AQ8TE12 382 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 CNDP2Q96KP4 475 aaKnown RBP15.78■□□□□ 0.12
UPF3A-208ENST00000484246 NAPGQ99747 312 aaPredicted RBP15.78■□□□□ 0.12
UPF3A-208ENST00000484246 APOL2Q9BQE5 337 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 CLPBQ9H078 707 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 RMI1Q9H9A7 625 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 RAB6BQ9NRW1 208 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 SMOXQ9NWM0 555 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 PKP3Q9Y446 797 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 DOCK9Q9BZ29 2069 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 TMEM131Q92545 1883 aa15.78■□□□□ 0.12
UPF3A-208ENST00000484246 GOLGA6L10A0A0M3HER8 536 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 FANCGO15287 622 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 SIGLEC6O43699 453 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 USP12O75317 370 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 TRIM16O95361 564 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 CRTAMO95727 393 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 SLC4A1P02730 911 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 LPOP22079 712 aaPredicted RBP15.77■□□□□ 0.12
UPF3A-208ENST00000484246 PMLP29590 882 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 SPAM1P38567 509 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 ACADVLP49748 655 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 ZNF140P52738 457 aaPredicted RBP15.77■□□□□ 0.12
UPF3A-208ENST00000484246 ILKQ13418 452 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 HS1BP3Q53T59 392 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 C6orf132Q5T0Z8 1188 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 ALS2CLQ60I27 953 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 TTC27Q6P3X3 843 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 NYAP1Q6ZVC0 841 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 ADAMTS14Q8WXS8 1223 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 GLYATL1Q969I3 302 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 MAGOHBQ96A72 148 aaKnown RBP15.77■□□□□ 0.12
UPF3A-208ENST00000484246 BOCQ9BWV1 1114 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 IL26Q9NPH9 171 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 APOBEC2Q9Y235 224 aaKnown RBP15.77■□□□□ 0.12
UPF3A-208ENST00000484246 NEU2Q9Y3R4 380 aa15.77■□□□□ 0.12
UPF3A-208ENST00000484246 LY6G6EA0A0G2JKS1 128 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 CTAGE9A4FU28 777 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 C2orf81A6NN90 581 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 GAPDHSO14556 408 aaPredicted RBP15.76■□□□□ 0.11
UPF3A-208ENST00000484246 STX7O15400 261 aaKnown RBP15.76■□□□□ 0.11
UPF3A-208ENST00000484246 FFAR2O15552 330 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 LDB2O43679 373 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 PHF2O75151 1096 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 FUCA1P04066 466 aa15.76■□□□□ 0.11
UPF3A-208ENST00000484246 FTH1P19P0C7X4 201 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms