RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 GLIS1Q8NBF1 620 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 GPR26Q8NDV2 337 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 BAHD1Q8TBE0 780 aaPredicted RBP20.8■□□□□ 0.92
SEC13-217ENST00000482647 BRSK1Q8TDC3 778 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 PLEKHG4BQ96PX9 1271 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 ZSCAN5AQ9BUG6 496 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 SPATA16Q9BXB7 569 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 TCEAL2Q9H3H9 227 aaPredicted RBP20.8■□□□□ 0.92
SEC13-217ENST00000482647 FGF22Q9HCT0 170 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 BPIFA1Q9NP55 256 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 SMARCAL1Q9NZC9 954 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 IL17CQ9P0M4 197 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 SAR1BQ9Y6B6 198 aa20.8■□□□□ 0.92
SEC13-217ENST00000482647 FFAR2O15552 330 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 CRTAMO95727 393 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 CEACAM5P06731 702 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 ALPPL2P10696 532 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 SIM1P81133 766 aaPredicted RBP20.79■□□□□ 0.92
SEC13-217ENST00000482647 PDE1BQ01064 536 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 SEMA5AQ13591 1074 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 ELOCQ15369 112 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 TAF1AQ15573 450 aaPredicted RBP20.79■□□□□ 0.92
SEC13-217ENST00000482647 CYP1B1Q16678 543 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 PDPK2PQ6A1A2 396 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 GLRX5Q86SX6 157 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 FSTL5Q8N475 847 aaPredicted RBP20.79■□□□□ 0.92
SEC13-217ENST00000482647 TRAM1L1Q8N609 369 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 OR1E3Q8WZA6 343 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 FRMD8Q9BZ67 464 aaPredicted RBP20.79■□□□□ 0.92
SEC13-217ENST00000482647 CAAP1Q9H8G2 361 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 CYP4F12Q9HCS2 524 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.79■□□□□ 0.92
SEC13-217ENST00000482647 FTSJ1Q9UET6 329 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 MOSPD1Q9UJG1 213 aa20.79■□□□□ 0.92
SEC13-217ENST00000482647 SPAARA0A1B0GVQ0 90 aa20.78■□□□□ 0.92
SEC13-217ENST00000482647 INPP4BO15327 924 aa20.78■□□□□ 0.92
SEC13-217ENST00000482647 STX7O15400 261 aaKnown RBP20.78■□□□□ 0.92
SEC13-217ENST00000482647 TNFSF14O43557 240 aa20.78■□□□□ 0.92
SEC13-217ENST00000482647 LDOC1O95751 146 aaPredicted RBP20.78■□□□□ 0.92
SEC13-217ENST00000482647 LPOP22079 712 aaPredicted RBP20.78■□□□□ 0.92
SEC13-217ENST00000482647 COILP38432 576 aaPredicted RBP20.78■□□□□ 0.92
SEC13-217ENST00000482647 MSLNQ13421 630 aaPredicted RBP20.78■□□□□ 0.92
SEC13-217ENST00000482647 C17orf53Q8N3J3 647 aaPredicted RBP20.78■□□□□ 0.92
SEC13-217ENST00000482647 OR4C6Q8NH72 309 aa20.78■□□□□ 0.92
SEC13-217ENST00000482647 PDXPQ96GD0 296 aa20.78■□□□□ 0.92
SEC13-217ENST00000482647 COX14Q96I36 57 aa20.78■□□□□ 0.92
SEC13-217ENST00000482647 LRRC61Q9BV99 259 aa20.78■□□□□ 0.92
SEC13-217ENST00000482647 DUSP23Q9BVJ7 150 aa20.78■□□□□ 0.92
SEC13-217ENST00000482647 MRPL40Q9NQ50 206 aaKnown RBP20.78■□□□□ 0.92
SEC13-217ENST00000482647 NLGN3Q9NZ94 848 aa20.78■□□□□ 0.92
SEC13-217ENST00000482647 CNOT6Q9ULM6 557 aaKnown RBP20.78■□□□□ 0.92
SEC13-217ENST00000482647 SLC17A4Q9Y2C5 497 aa20.78■□□□□ 0.92
SEC13-217ENST00000482647 ARL5AQ9Y689 179 aa20.78■□□□□ 0.92
SEC13-217ENST00000482647 TMEM131Q92545 1883 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 PRSS38A1L453 326 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 FADS2P1A8MWK0 482 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 LMO7DNF2Z398 122 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 TRIM38O00635 465 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 TPP1O14773 563 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 SUN1O94901 812 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 GAS8O95995 478 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 APRTP07741 180 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 C1orf61Q13536 156 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 TTC27Q6P3X3 843 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 CCDC137Q6PK04 289 aaKnown RBP20.77■□□□□ 0.92
SEC13-217ENST00000482647 DOK6Q6PKX4 331 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 NYAP1Q6ZVC0 841 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 SDR16C5Q8N3Y7 309 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 DTX3LQ8TDB6 740 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 CNDP2Q96KP4 475 aaKnown RBP20.77■□□□□ 0.92
SEC13-217ENST00000482647 CARS2Q9HA77 564 aaKnown RBP20.77■□□□□ 0.92
SEC13-217ENST00000482647 IL26Q9NPH9 171 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 TMEM98Q9Y2Y6 226 aa20.77■□□□□ 0.92
SEC13-217ENST00000482647 SIGLEC6O43699 453 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 BUD23O43709 281 aaKnown RBP20.76■□□□□ 0.91
SEC13-217ENST00000482647 PHF2O75151 1096 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 IVLP07476 585 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 ANXA6P08133 673 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 TPH1P17752 444 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 SPAM1P38567 509 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 POLD2P49005 469 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 FNTAP49354 379 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 KCTD16Q68DU8 428 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 PPP1R21Q6ZMI0 780 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 TRIM74Q86UV6 250 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 DNAAF3Q8N9W5 541 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 SCG3Q8WXD2 468 aaKnown RBP20.76■□□□□ 0.91
SEC13-217ENST00000482647 CAPZA3Q96KX2 299 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 CLPBQ9H078 707 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 SUFUQ9UMX1 484 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 DOLKQ9UPQ8 538 aa20.76■□□□□ 0.91
SEC13-217ENST00000482647 GLYATL1P3A0A0U1RQE8 302 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 YY2O15391 372 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 SLC25A14O95258 325 aaPredicted RBP20.75■□□□□ 0.91
SEC13-217ENST00000482647 ASMTLO95671 621 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 KRT14P02533 472 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 GIMD1P0DJR0 217 aa20.75■□□□□ 0.91
SEC13-217ENST00000482647 ETF1P62495 437 aaKnown RBP20.75■□□□□ 0.91
SEC13-217ENST00000482647 BASP1P80723 227 aaKnown RBP20.75■□□□□ 0.91
SEC13-217ENST00000482647 CDH17Q12864 832 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms