RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 RCBTB1Q8NDN9 531 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 RIOK2Q9BVS4 552 aaKnown RBP15.17■□□□□ 0.02
LIMS3-203ENST00000480744 PACSIN1Q9BY11 444 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 SEMA4CQ9C0C4 833 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 PCDH9Q9HC56 1237 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 FOXJ2Q9P0K8 574 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 UVRAGQ9P2Y5 699 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.17■□□□□ 0.02
LIMS3-203ENST00000480744 CFAP46Q8IYW2 2715 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 SDK2Q58EX2 2172 aa15.17■□□□□ 0.02
LIMS3-203ENST00000480744 ZNF462Q96JM2 2506 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 TRBV23OR9-2A0A075B6M9 112 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 CLDN7O95471 211 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 PYGLP06737 847 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 TPM3P06753 285 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 MX2P20592 715 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 NIPAL4Q0D2K0 466 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 NKAIN2Q5VXU1 208 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 ALG1LQ6GMV1 187 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 ZNF765Q7L2R6 523 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 VASH2Q86V25 355 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 CCDC13Q8IYE1 715 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 PQLC3Q8N755 202 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 ARRDC2Q8TBH0 407 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 CCDC74BQ96LY2 380 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 ZNF830Q96NB3 372 aaPredicted RBP15.16■□□□□ 0.02
LIMS3-203ENST00000480744 TSGA13Q96PP4 275 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 XPO4Q9C0E2 1151 aaKnown RBP15.16■□□□□ 0.02
LIMS3-203ENST00000480744 DEF6Q9H4E7 631 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 SEPT10Q9P0V9 454 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 AMACRQ9UHK6 382 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 ACSL6Q9UKU0 697 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 DNPEPQ9ULA0 475 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 NENFQ9UMX5 172 aa15.16■□□□□ 0.02
LIMS3-203ENST00000480744 PIEZO2Q9H5I5 2752 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 IGHV5-10-1A0A0J9YXX1 117 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 C1orf232A0A0U1RR37 186 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 C9orf172C9J069 976 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 PPM1DO15297 605 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 EFSO43281 561 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 PRLP01236 227 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 JCHAINP01591 159 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 CCL4P13236 92 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 MPSTP25325 297 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 CD1CP29017 333 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 CD86P42081 329 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 MESDQ14696 234 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 NR1D2Q14995 579 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 PYCR3Q53H96 274 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 MANEAQ5SRI9 462 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 TMEM164Q5U3C3 297 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 ZNF761Q86XN6 746 aaPredicted RBP15.15■□□□□ 0.02
LIMS3-203ENST00000480744 NRSN1Q8IZ57 195 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 EXD1Q8NHP7 514 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 FATE1Q969F0 183 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 FAF2Q96CS3 445 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 SCARF2Q96GP6 870 aaPredicted RBP15.15■□□□□ 0.02
LIMS3-203ENST00000480744 KCNK4Q9NYG8 393 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 ZNHIT2Q9UHR6 403 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 PRKAB1Q9Y478 270 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 PCDHB11Q9Y5F2 797 aa15.15■□□□□ 0.02
LIMS3-203ENST00000480744 LRRD1A4D1F6 860 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 KCNK1O00180 336 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 ATP1A1P05023 1023 aaKnown RBP15.14■□□□□ 0.01
LIMS3-203ENST00000480744 KDELR1P24390 212 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 GPR3P46089 330 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 RPL26P61254 145 aaKnown RBP15.14■□□□□ 0.01
LIMS3-203ENST00000480744 SLC10A2Q12908 348 aaPredicted RBP15.14■□□□□ 0.01
LIMS3-203ENST00000480744 SLC18A3Q16572 532 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 CLPPQ16740 277 aaPredicted RBP15.14■□□□□ 0.01
LIMS3-203ENST00000480744 ZNF574Q6ZN55 896 aaPredicted RBP15.14■□□□□ 0.01
LIMS3-203ENST00000480744 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.14■□□□□ 0.01
LIMS3-203ENST00000480744 JPH3Q8WXH2 748 aaPredicted RBP15.14■□□□□ 0.01
LIMS3-203ENST00000480744 RAPGEF5Q92565 580 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 HDAC11Q96DB2 347 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 SGF29Q96ES7 293 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 MED8Q96G25 268 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 COX14Q96I36 57 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 DTLQ9NZJ0 730 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 LCMT1Q9UIC8 334 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 RPL26L1Q9UNX3 145 aaKnown RBP15.14■□□□□ 0.01
LIMS3-203ENST00000480744 HEY1Q9Y5J3 304 aa15.14■□□□□ 0.01
LIMS3-203ENST00000480744 IGHV1OR21-1A0A087WYE8 117 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 HGSO14964 777 aaPredicted RBP15.13■□□□□ 0.01
LIMS3-203ENST00000480744 AKR1B10O60218 316 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 HNRNPH3P31942 346 aaKnown RBP15.13■□□□□ 0.01
LIMS3-203ENST00000480744 CSF2RBP32927 897 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 MAN1A1P33908 653 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 LIMK2P53671 638 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 LRP8Q14114 963 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 GALNT3Q14435 633 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 QPCTQ16769 361 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 FAM182AQ5T1J6 154 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 CHST15Q7LFX5 561 aaPredicted RBP15.13■□□□□ 0.01
LIMS3-203ENST00000480744 NLRP8Q86W28 1048 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 CCHCR1Q8TD31 782 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 SLC37A2Q8TED4 501 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 AHCYL2Q96HN2 611 aaKnown RBP15.13■□□□□ 0.01
LIMS3-203ENST00000480744 RNF157Q96PX1 679 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 SLC38A3Q99624 504 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms