RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 UGT1A6P19224 532 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 UGT1A1P22309 533 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 UGT1A4P22310 534 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 UGT1A3P35503 534 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 UGT1A5P35504 534 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 ABCG1P45844 678 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 LEPRP48357 1165 aaKnown RBP17.5■□□□□ 0.39
UPF3A-206ENST00000480362 SFSWAPQ12872 951 aaKnown RBP17.5■□□□□ 0.39
UPF3A-206ENST00000480362 TNFAIP8L3Q5GJ75 292 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 KCTD16Q68DU8 428 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 PSAPL1Q6NUJ1 521 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 USP30Q70CQ3 517 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 TAS2R42Q7RTR8 314 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 SNX20Q7Z614 316 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 KBTBD6Q86V97 674 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 RAVER1Q8IY67 606 aaKnown RBP17.5■□□□□ 0.39
UPF3A-206ENST00000480362 PIANPQ8IYJ0 282 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 NRSN1Q8IZ57 195 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 ZNF398Q8TD17 642 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 ATP6V1G3Q96LB4 118 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 MCMBPQ9BTE3 642 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 ABCG8Q9H221 673 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 SIT1Q9Y3P8 196 aa17.5■□□□□ 0.39
UPF3A-206ENST00000480362 HMX2A2RU54 273 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 TRIM49D1C9J1S8 452 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 H3BQF6 201 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 GPR39O43194 453 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 PLRG1O43660 514 aaKnown RBP17.49■□□□□ 0.39
UPF3A-206ENST00000480362 RECQL5O94762 991 aaPredicted RBP17.49■□□□□ 0.39
UPF3A-206ENST00000480362 KRT15P19012 456 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 ITGALP20701 1170 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 CNTFP26441 200 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 PMLP29590 882 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 CD151P48509 253 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 DCDC1P59894 354 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 BMPR2Q13873 1038 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 TYSND1Q2T9J0 566 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 ZNF789Q5FWF6 425 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 CNSTQ6PJW8 725 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 TAOK1Q7L7X3 1001 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 GALNT7Q86SF2 657 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 FAM124AQ86V42 546 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 ZC3HC1Q86WB0 502 aaKnown RBP17.49■□□□□ 0.39
UPF3A-206ENST00000480362 TSTD1Q8NFU3 115 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 OR14C36Q8NHC7 312 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 SCAMP4Q969E2 229 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.49■□□□□ 0.39
UPF3A-206ENST00000480362 DTD2Q96FN9 168 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 ATXN7L3BQ96GX2 97 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 TCF12Q99081 682 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 SPATA16Q9BXB7 569 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 CDH19Q9H159 772 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 STMN4Q9H169 189 aaPredicted RBP17.49■□□□□ 0.39
UPF3A-206ENST00000480362 CHRDQ9H2X0 955 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 RHOJQ9H4E5 214 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 ITM2CQ9NQX7 267 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 FAM53CQ9NYF3 392 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 NFKBIL1Q9UBC1 381 aaPredicted RBP17.49■□□□□ 0.39
UPF3A-206ENST00000480362 FZD4Q9ULV1 537 aa17.49■□□□□ 0.39
UPF3A-206ENST00000480362 MTO1Q9Y2Z2 717 aaKnown RBP17.49■□□□□ 0.39
UPF3A-206ENST00000480362 ZNF106Q9H2Y7 1883 aaKnown RBP17.48■□□□□ 0.39
UPF3A-206ENST00000480362 A0A1W2PPM1 405 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 IGLON5A6NGN9 336 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 HMGB1P1B2RPK0 211 aaPredicted RBP17.48■□□□□ 0.39
UPF3A-206ENST00000480362 NDUFS3O75489 264 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 ITGA2BP08514 1039 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 ATP5DP30049 168 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 CA5AP35218 305 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 RPS9P46781 194 aaKnown RBP17.48■□□□□ 0.39
UPF3A-206ENST00000480362 TPMTP51580 245 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 LIMK2P53671 638 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 CREB5Q02930 508 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 SIGLEC14Q08ET2 396 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 NFATC2Q13469 925 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 GPR33Q49SQ1 333 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 TJAP1Q5JTD0 557 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 AARS2Q5JTZ9 985 aaKnown RBP17.48■□□□□ 0.39
UPF3A-206ENST00000480362 MROH9Q5TGP6 573 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 CYP2U1Q7Z449 544 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 SPEM1Q8N4L4 309 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 DTX3LQ8TDB6 740 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 MZB1Q8WU39 189 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 SCG3Q8WXD2 468 aaKnown RBP17.48■□□□□ 0.39
UPF3A-206ENST00000480362 EDAQ92838 391 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 TLCD1Q96CP7 247 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 MTBPQ96DY7 904 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 HHIPQ96QV1 700 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 RIOK2Q9BVS4 552 aaKnown RBP17.48■□□□□ 0.39
UPF3A-206ENST00000480362 CD93Q9NPY3 652 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 EBF1Q9UH73 591 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 CRLS1Q9UJA2 301 aa17.48■□□□□ 0.39
UPF3A-206ENST00000480362 TBC1D3DA0A087WVF3 549 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TBC1D3IA0A087WXS9 549 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TBC1D3EA0A087X179 549 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TBC1D3KA0A087X1G2 549 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TRBV5-4A0A0C4DH59 114 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TBC1D3FA6NER0 549 aaPredicted RBP17.47■□□□□ 0.39
UPF3A-206ENST00000480362 AGAP14A8MT82 685 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TBC1D3LB9A6J9 549 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 PFDN6O15212 129 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms