RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 MORF4L2Q15014 288 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 DENND5AQ6IQ26 1287 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 PCSK4Q6UW60 755 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 NLRP9Q7RTR0 991 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 ABI3BPQ7Z7G0 1075 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 HORMAD1Q86X24 394 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 JAMLQ86YT9 394 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 FAM181AQ8N9Y4 354 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 NETO2Q8NC67 525 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 BBOF1Q8ND07 529 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 LSM14AQ8ND56 463 aaKnown RBP8.9□□□□□ -0.98
DDX56-211ENST00000479602 CCDC110Q8TBZ0 833 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 GRIN3AQ8TCU5 1115 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 LRRC39Q96DD0 335 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 IFT43Q96FT9 208 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 BMFQ96LC9 184 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 PLEKHG4BQ96PX9 1271 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 FSD1LQ9BXM9 530 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 FOXP3Q9BZS1 431 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 CAAP1Q9H8G2 361 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 MRM3Q9HC36 420 aaKnown RBP8.9□□□□□ -0.98
DDX56-211ENST00000479602 CASS4Q9NQ75 786 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 ZFR2Q9UPR6 939 aaKnown RBP8.9□□□□□ -0.98
DDX56-211ENST00000479602 HS3ST3A1Q9Y663 406 aa8.9□□□□□ -0.98
DDX56-211ENST00000479602 TLN1Q9Y490 2541 aaKnown RBP8.9□□□□□ -0.99
DDX56-211ENST00000479602 TENM4Q6N022 2769 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 AGAP14A8MT82 685 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 DNALI1O14645 258 aaPredicted RBP8.89□□□□□ -0.99
DDX56-211ENST00000479602 TP73O15350 636 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 SEC31AO94979 1220 aaKnown RBP8.89□□□□□ -0.99
DDX56-211ENST00000479602 PIGNO95427 931 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 MT-CYBP00156 380 aaPredicted RBP8.89□□□□□ -0.99
DDX56-211ENST00000479602 KRT14P02533 472 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 CKMT1AP12532 417 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 TNNT3P45378 269 aaPredicted RBP8.89□□□□□ -0.99
DDX56-211ENST00000479602 STC1P52823 247 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 SARNPP82979 210 aaKnown RBP8.89□□□□□ -0.99
DDX56-211ENST00000479602 E2F1Q01094 437 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 DR1Q01658 176 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 CAV1Q03135 178 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 FGL2Q14314 439 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 FRG1Q14331 258 aaKnown RBP8.89□□□□□ -0.99
DDX56-211ENST00000479602 STAT4Q14765 748 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 LLGL1Q15334 1064 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 QPCTQ16769 361 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 SETMARQ53H47 684 aaPredicted RBP8.89□□□□□ -0.99
DDX56-211ENST00000479602 CFAP58Q5T655 872 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 RNASEH2BQ5TBB1 312 aaKnown RBP8.89□□□□□ -0.99
DDX56-211ENST00000479602 HES3Q5TGS1 186 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 ESRP1Q6NXG1 681 aaKnown RBP8.89□□□□□ -0.99
DDX56-211ENST00000479602 LIPIQ6XZB0 460 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 PPP1R21Q6ZMI0 780 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 LEKR1Q6ZMV7 388 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 TMC3Q7Z5M5 1100 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 PPIL6Q8IXY8 311 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 CNPY4Q8N129 248 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 SLC22A18ASQ8N1D0 253 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 NAT8LQ8N9F0 302 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 GLIS1Q8NBF1 620 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 OR4C6Q8NH72 309 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 BRSK1Q8TDC3 778 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.89□□□□□ -0.99
DDX56-211ENST00000479602 CPT1BQ92523 772 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 KLHDC7BQ96G42 594 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 HIC2Q96JB3 615 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 TBATAQ96M53 351 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 COQ10AQ96MF6 247 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 RBM15Q96T37 977 aaKnown RBP eCLIP8.89□□□□□ -0.99
DDX56-211ENST00000479602 KLF6Q99612 283 aaPredicted RBP8.89□□□□□ -0.99
DDX56-211ENST00000479602 TBL1YQ9BQ87 522 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 ERP44Q9BS26 406 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 NAT9Q9BTE0 207 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 C1QTNF7Q9BXJ2 289 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 AP1M1Q9BXS5 423 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 IL22Q9GZX6 179 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 DDX47Q9H0S4 455 aaKnown RBP8.89□□□□□ -0.99
DDX56-211ENST00000479602 RAB17Q9H0T7 212 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 PCDH12Q9NPG4 1184 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 RAB6BQ9NRW1 208 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 SMOXQ9NWM0 555 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 UCKL1Q9NWZ5 548 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 WHRNQ9P202 907 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 B4GALT6Q9UBX8 382 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 CA5BQ9Y2D0 317 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 PCDHGC4Q9Y5F7 938 aa8.89□□□□□ -0.99
DDX56-211ENST00000479602 LRRK1Q38SD2 2015 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 MYO18BQ8IUG5 2567 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 A0A1W2PQU0 124 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 CTAGE15A4D2H0 777 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 MROH6A6NGR9 719 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 GPR89AB7ZAQ6 455 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 E7ESA3 106 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 C1QL1O75973 258 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 DXOO77932 396 aaKnown RBP8.88□□□□□ -0.99
DDX56-211ENST00000479602 URI1O94763 535 aaPredicted RBP8.88□□□□□ -0.99
DDX56-211ENST00000479602 IFNB1P01574 187 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 PDHA1P08559 390 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 GPR89BP0CG08 455 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 CTAGE8P0CG41 777 aa8.88□□□□□ -0.99
DDX56-211ENST00000479602 ITIH2P19823 946 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms