RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 SH3BGRLO75368 114 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 SPATA31D3P0C874 917 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 HOXA11P31270 313 aaPredicted RBP14.3□□□□□ -0.12
COL20A1-206ENST00000479501 GPC1P35052 558 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 XIAPP98170 497 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 CNTN1Q12860 1018 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 SFSWAPQ12872 951 aaKnown RBP14.3□□□□□ -0.12
COL20A1-206ENST00000479501 LPCAT4Q643R3 524 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 CNSTQ6PJW8 725 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 SPATA31D4Q6ZUB0 917 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 SVOPQ8N4V2 548 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 BRSK1Q8TDC3 778 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 OSGEPL1Q9H4B0 414 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 ZNF395Q9H8N7 513 aaPredicted RBP14.3□□□□□ -0.12
COL20A1-206ENST00000479501 HPS4Q9NQG7 708 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 PSMD13Q9UNM6 376 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 ZFP37Q9Y6Q3 630 aaPredicted RBP14.3□□□□□ -0.12
COL20A1-206ENST00000479501 HLA-DQB2P05538 268 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 PITX1P78337 314 aaPredicted RBP14.3□□□□□ -0.12
COL20A1-206ENST00000479501 GALNT2Q10471 571 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 SETMARQ53H47 684 aaPredicted RBP14.3□□□□□ -0.12
COL20A1-206ENST00000479501 ZNF621Q6ZSS3 439 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 EID3Q8N140 333 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 ELMO1Q92556 727 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 C19orf60Q96EN9 201 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 MYO19Q96H55 970 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 ZFYVE1Q9HBF4 777 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 ZNHIT2Q9UHR6 403 aa14.3□□□□□ -0.12
COL20A1-206ENST00000479501 HS6ST1O60243 411 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 PCDH8O95206 1070 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 RPL17P18621 184 aaKnown RBP14.29□□□□□ -0.12
COL20A1-206ENST00000479501 ADSLP30566 484 aaPredicted RBP14.29□□□□□ -0.12
COL20A1-206ENST00000479501 ST13P50502 369 aaKnown RBP14.29□□□□□ -0.12
COL20A1-206ENST00000479501 OLIG2Q13516 323 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 LYPLAL1Q5VWZ2 237 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 DET1Q7L5Y6 550 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 SYT12Q8IV01 421 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 MIEF1Q9NQG6 463 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 A0A0J9YYE9 177 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 CNMDO75829 334 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 KCNH1O95259 989 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 GOT2P00505 430 aaKnown RBP14.29□□□□□ -0.12
COL20A1-206ENST00000479501 EDN1P05305 212 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 RPL38P63173 70 aaKnown RBP14.29□□□□□ -0.12
COL20A1-206ENST00000479501 AMIGO2Q86SJ2 522 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 ACTRT2Q8TDY3 377 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 SNX6Q9UNH7 406 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 MYH7BA7E2Y1 1941 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 CAPN8A6NHC0 703 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 IFRD1O00458 451 aaPredicted RBP14.29□□□□□ -0.12
COL20A1-206ENST00000479501 STK25O00506 426 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 INSIG1O15503 277 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 FAM20BO75063 409 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 IRF9Q00978 393 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 CREMQ03060 361 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 SLC10A7Q0GE19 358 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 CPSF6Q16630 551 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL20A1-206ENST00000479501 TIGD2Q4W5G0 525 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 CLEC6AQ6EIG7 209 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 FBXL19Q6PCT2 694 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 PRSS55Q6UWB4 352 aaPredicted RBP14.29□□□□□ -0.12
COL20A1-206ENST00000479501 SFRP1Q8N474 314 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 FIBCD1Q8N539 461 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 CNTD1Q8N815 330 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 FBXO22Q8NEZ5 403 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 KIAA1522Q9P206 1035 aaPredicted RBP14.29□□□□□ -0.12
COL20A1-206ENST00000479501 SLC9A3R1O14745 358 aaPredicted RBP14.29□□□□□ -0.12
COL20A1-206ENST00000479501 CHRNGP07510 517 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL20A1-206ENST00000479501 TRAPPC5Q8IUR0 188 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 SETD9Q8NE22 299 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 CAPSLQ8WWF8 208 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 PNPLA3Q9NST1 481 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 CLCA2Q9UQC9 943 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 DMTF1Q9Y222 760 aa14.29□□□□□ -0.12
COL20A1-206ENST00000479501 ITM2AO43736 263 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 BNIP2Q12982 314 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 TRAF3Q13114 568 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 GPR107Q5VW38 600 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 FBXL22Q6P050 247 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 CERS6Q6ZMG9 384 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 TMEM130Q8N3G9 435 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 OR7A2PQ8NGA2 310 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 B3GALT6Q96L58 329 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 TMEM165Q9HC07 324 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 CFAP97Q9P2B7 532 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 EGFL7Q9UHF1 273 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 EVLQ9UI08 416 aaPredicted RBP14.28□□□□□ -0.12
COL20A1-206ENST00000479501 AP3M1Q9Y2T2 418 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 NPEPPSL1A6NEC2 478 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 C9IYK1 514 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 KPNA5O15131 536 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 IFNA14P01570 189 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 ABCB1P08183 1280 aaPredicted RBP14.28□□□□□ -0.12
COL20A1-206ENST00000479501 IMPDH2P12268 514 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 CDH3P22223 829 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 GJA9P57773 515 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 PEX6Q13608 980 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 RALGPS1Q5JS13 557 aa14.28□□□□□ -0.12
COL20A1-206ENST00000479501 PGAM4Q8N0Y7 254 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms