RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PDILTQ8N807 584 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 KDM1BQ8NB78 822 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 PSPC1Q8WXF1 523 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 DNASE2BQ8WZ79 361 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 SMARCE1Q969G3 411 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 ZNF333Q96JL9 665 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 FBRSL1Q9HCM7 1045 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 ASAH2Q9NR71 780 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 SMYD2Q9NRG4 433 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 PLSCR4Q9NRQ2 329 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 ABI3Q9P2A4 366 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 HAO1Q9UJM8 370 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 MKLN1Q9UL63 735 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 CORO1CQ9ULV4 474 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 TTLL3Q9Y4R7 772 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 TNS3Q68CZ2 1445 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 TNS1Q9HBL0 1735 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 PARP4Q9UKK3 1724 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 UTYO14607 1347 aa4.17□□□□□ -1.74
CDC42BPA-212ENST00000478573 SBF2Q86WG5 1849 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 THSD7AQ9UPZ6 1657 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 SCN5AQ14524 2016 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 FAM237BA0A1B0GVD1 139 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 A8MZ25 164 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 NPIPB11E5RHQ5 1161 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 HSPB6O14558 160 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 VILLO15195 856 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 FIBPO43427 364 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 AHCYL1O43865 530 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 TSPAN9O75954 239 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 CAMTA2O94983 1202 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 IGKV3-20P01619 116 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 CYP1A2P05177 515 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 EDN2P20800 178 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 TNFSF8P32971 234 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 HADHAP40939 763 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 RAD52P43351 418 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 PIP4K2AP48426 406 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 GNAQP50148 359 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 GAS1P54826 345 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 DSCR9P59020 149 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 NLRP5P59047 1200 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 PRAMEP78395 509 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 NIPAL4Q0D2K0 466 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 OLIG2Q13516 323 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 ALG11Q2TAA5 492 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 DUSP28Q4G0W2 176 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 PLEKHO1Q53GL0 409 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 TTI2Q6NXR4 508 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 CPLX2Q6PUV4 134 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 DHX40Q8IX18 779 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 KIAA2013Q8IYS2 634 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 LRRC57Q8N9N7 239 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 RASSF8Q8NHQ8 419 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 BICD2Q8TD16 824 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 POMGNT1Q8WZA1 660 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 ATOH1Q92858 354 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 SNAPC3Q92966 411 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 GTF3C6Q969F1 213 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 RNF183Q96D59 192 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 FAM120BQ96EK7 910 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 MAP6D1Q9H9H5 199 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 KRCC1Q9NPI7 259 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 CD93Q9NPY3 652 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 PLEKHB1Q9UF11 243 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 POLG2Q9UHN1 485 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 RAP2CQ9Y3L5 183 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 NPHP3Q7Z494 1330 aa4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 VIRMAQ69YN4 1812 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-212ENST00000478573 GPRASP1Q5JY77 1395 aa4.15□□□□□ -1.74
CDC42BPA-212ENST00000478573 PLEKHH1Q9ULM0 1364 aa4.15□□□□□ -1.74
CDC42BPA-212ENST00000478573 GLI3P10071 1580 aa4.15□□□□□ -1.74
CDC42BPA-212ENST00000478573 COL18A1P39060 1754 aa4.15□□□□□ -1.74
CDC42BPA-212ENST00000478573 A0A0U1RQF3 1178 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 GAGE12JA6NER3 117 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 HSPB2A8KAH6 182 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 BECN2A8MW95 431 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 MYO1GB0I1T2 1018 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 EIF3CLB5ME19 914 aaKnown RBP4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 KLRF2D3W0D1 207 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 PTGES3LE9PB15 166 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 IFNL4K9M1U5 179 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 SLC25A17O43808 307 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 TMCC2O75069 709 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 OR2C1O95371 312 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 IPO7O95373 1038 aaKnown RBP4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 HOXC6P09630 235 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 CSH1P0DML2 217 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 CSH2P0DML3 217 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 ENO3P13929 434 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 PORP16435 677 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 SRD5A1P18405 259 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 PPARGP37231 505 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 UBA7P41226 1012 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 GARSP41250 739 aaKnown RBP4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 CXCR3P49682 368 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 MC1RQ01726 317 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 ROR2Q01974 943 aaKnown RBP4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 FAM27E3Q08E93 113 aa4.15□□□□□ -1.75
CDC42BPA-212ENST00000478573 EPS8Q12929 822 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms