RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 SCG3Q8WXD2 468 aaKnown RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 UBXN4Q92575 508 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 IMP4Q96G21 291 aaKnown RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 TEKT5Q96M29 485 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 FAM118BQ9BPY3 351 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 MLPHQ9BV36 600 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 RIOK2Q9BVS4 552 aaKnown RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 BOCQ9BWV1 1114 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 TEX101Q9BY14 249 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 ABCG4Q9H172 646 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 SLC25A51Q9H1U9 297 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CCDC86Q9H6F5 360 aaKnown RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CARS2Q9HA77 564 aaKnown RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 PHPT1Q9NRX4 125 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-221ENST00000477561 GPR34Q9UPC5 381 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 SHOC2Q9UQ13 582 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 CLCA2Q9UQC9 943 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 TMEM98Q9Y2Y6 226 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 PCDHA3Q9Y5H8 950 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 DGKBQ9Y6T7 804 aa8.25□□□□□ -1.09
HDAC6-221ENST00000477561 EPG5Q9HCE0 2579 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 UQCRHLA0A096LP55 91 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 PRSS38A1L453 326 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 EME2A4GXA9 379 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 TMEM8BA6NDV4 472 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 SRRM3A6NNA2 597 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 H7C0C1 242 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 PGRMC1O00264 195 aaKnown RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 PDE2AO00408 941 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 TNFRSF10CO14798 259 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 ZNF185O15231 689 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 INPP4BO15327 924 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 SOD1P00441 154 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 CAPNS1P04632 268 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 CEACAM5P06731 702 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 UQCRHP07919 91 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 PYGMP11217 842 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 ZNF30P17039 623 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 RBL1P28749 1068 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 CXCR5P32302 372 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 CD68P34810 354 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 ATP5OP48047 213 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 RPIAP49247 311 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 RPL26P61254 145 aaKnown RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 OTUD4Q01804 1114 aaKnown RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 CDK18Q07002 472 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 NOMO1Q15155 1222 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 PPP2R5EQ16537 467 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 CCDC70Q6NSX1 233 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 BBS12Q6ZW61 710 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 PID1Q7Z2X4 250 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 LYSMD3Q7Z3D4 306 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 ZNF572Q7Z3I7 529 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 ZNF567Q8N184 647 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 RASGEF1CQ8N431 466 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 SLC25A41Q8N5S1 370 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 PDCD7Q8N8D1 485 aaKnown RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 KYQ8NBH2 561 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 FAM46DQ8NEK8 389 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 HTR3CQ8WXA8 447 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 ALG3Q92685 438 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 GLMNQ92990 594 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 TBATAQ96M53 351 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 TRIB3Q96RU7 358 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 ADGRE3Q9BY15 652 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 FRMD8Q9BZ67 464 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 OSBPL8Q9BZF1 889 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 SYNDIG1Q9H7V2 258 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 USP29Q9HBJ7 922 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 EVA1BQ9NVM1 165 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 KCTD5Q9NXV2 234 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 KLHL8Q9P2G9 620 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 TTC7AQ9ULT0 858 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 PADI4Q9UM07 663 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 SUFUQ9UMX1 484 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 RPL26L1Q9UNX3 145 aaKnown RBP8.24□□□□□ -1.09
HDAC6-221ENST00000477561 PLEKHM1Q9Y4G2 1056 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 GPSM3Q9Y4H4 160 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 PCDHB1Q9Y5F3 818 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 AK5Q9Y6K8 562 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 IGF2RP11717 2491 aa8.24□□□□□ -1.09
HDAC6-221ENST00000477561 USP24Q9UPU5 2620 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 FREM2Q5SZK8 3169 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 GOLGA6L10A0A0M3HER8 536 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 B4DGG1 531 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 CCDC188H7C350 402 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 APOC4-APOC2K7ER74 178 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 AURKAO14965 403 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 CTIFO43310 598 aaKnown RBP8.23□□□□□ -1.09
HDAC6-221ENST00000477561 ASMTLO95671 621 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 APOC2P02655 101 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 GP1BAP07359 652 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 AK4P27144 223 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-221ENST00000477561 SPINT3P49223 89 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 COPS2P61201 443 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 DPTQ07507 201 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 LONRF2Q1L5Z9 754 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 CDCP2Q5VXM1 449 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 ALS2CLQ60I27 953 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 SLC30A9Q6PML9 568 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms