RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 DTD2Q96FN9 168 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 PEBP4Q96S96 227 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 ATP13A3Q9H7F0 1226 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 FBXO8Q9NRD0 319 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 PHPT1Q9NRX4 125 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-204ENST00000477429 TBC1D29Q9UFV1 150 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 HOOK1Q9UJC3 728 aaKnown RBP9.71□□□□□ -0.86
COL4A5-204ENST00000477429 CROTQ9UKG9 612 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 ATP6V1DQ9Y5K8 247 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 RPS6KL1Q9Y6S9 549 aa9.71□□□□□ -0.86
COL4A5-204ENST00000477429 A6NCN8 305 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 GOLGA6CA6NDK9 693 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 GOLGA6BA6NDN3 693 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 HTRA2O43464 458 aaPredicted RBP9.7□□□□□ -0.86
COL4A5-204ENST00000477429 PALMO75781 387 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 TIAF1O95411 115 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 GOLGA6DP0CG33 693 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 CTPS1P17812 591 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 TCN2P20062 427 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 VIPR1P32241 457 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 FASLGP48023 281 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 RAB15P59190 212 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 MRPL49Q13405 166 aaKnown RBP9.7□□□□□ -0.86
COL4A5-204ENST00000477429 TSR1Q2NL82 804 aaKnown RBP9.7□□□□□ -0.86
COL4A5-204ENST00000477429 CFAP58Q5T655 872 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 CPZQ66K79 652 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 TCTN3Q6NUS6 607 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 KDELC2Q7Z4H8 507 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 GALNT6Q8NCL4 622 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 NCSTNQ92542 709 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 TCTN2Q96GX1 697 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 OR2M4Q96R27 311 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 KCTD15Q96SI1 283 aaPredicted RBP9.7□□□□□ -0.86
COL4A5-204ENST00000477429 TUBGCP2Q9BSJ2 902 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 TBC1D10AQ9BXI6 508 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 STK33Q9BYT3 514 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 ABCG8Q9H221 673 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 GOLGA6AQ9NYA3 693 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 SCHIP1Q9P0W5 487 aaPredicted RBP9.7□□□□□ -0.86
COL4A5-204ENST00000477429 OAS3Q9Y6K5 1087 aaKnown RBP9.7□□□□□ -0.86
COL4A5-204ENST00000477429 ATRQ13535 2644 aa9.7□□□□□ -0.86
COL4A5-204ENST00000477429 CAPN5O15484 640 aaPredicted RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 DNAJC6O75061 913 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 FGFR1OPO95684 399 aaKnown RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 ATP1A1P05023 1023 aaKnown RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 PDHA1P08559 390 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 DLSTP36957 453 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 MAPK9P45984 424 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 ZNF143P52747 638 aaPredicted RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 NDST2P52849 883 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 JAM2P57087 298 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 MAXP61244 160 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 CHAF1BQ13112 559 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 GRM3Q14832 879 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 FAM182AQ5T1J6 154 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 RAET1GQ6H3X3 334 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 WDR74Q6RFH5 385 aaPredicted RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 MON1BQ7L1V2 547 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 CCDC13Q8IYE1 715 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 TEX19Q8NA77 164 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 CCDC112Q8NEF3 446 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 SSC4DQ8WTU2 575 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 PDCD6IPQ8WUM4 868 aaKnown RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 KIAA1143Q96AT1 154 aaPredicted RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 ELMO2Q96JJ3 720 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 MCEEQ96PE7 176 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 WDR24Q96S15 920 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 CINPQ9BW66 212 aaPredicted RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 TRIM7Q9C029 511 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 VPS16Q9H269 839 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 ZNF106Q9H2Y7 1883 aaKnown RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 NOD2Q9HC29 1040 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 PRDM8Q9NQV8 689 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 SAMSN1Q9NSI8 373 aaKnown RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 ETNK2Q9NVF9 386 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 TMEM51Q9NW97 253 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 LUZP4Q9P127 313 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 KIAA1468Q9P260 1216 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 RCOR3Q9P2K3 495 aaPredicted RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 CNOT6Q9ULM6 557 aaKnown RBP9.69□□□□□ -0.86
COL4A5-204ENST00000477429 KCNK6Q9Y257 313 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 PCDHGA10Q9Y5H3 936 aa9.69□□□□□ -0.86
COL4A5-204ENST00000477429 CDC14CA4D256 554 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 SIGLEC16A6NMB1 481 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 DFFAO00273 331 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 INPP4BO15327 924 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 MAP3K7O43318 606 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 KIF1CO43896 1103 aaKnown RBP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 KATNA1O75449 491 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 SORBS2O94875 1100 aaKnown RBP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 CPP00450 1065 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 ERCC2P18074 760 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 LEPRP48357 1165 aaKnown RBP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 GSCP56915 257 aaPredicted RBP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 TPI1P60174 286 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 RPS18P62269 152 aaKnown RBP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 GPLD1P80108 840 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 PTSQ03393 145 aa9.68□□□□□ -0.86
COL4A5-204ENST00000477429 NSUN2Q08J23 767 aaKnown RBP eCLIP9.68□□□□□ -0.86
COL4A5-204ENST00000477429 BIRC2Q13490 618 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms