RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 EFCAB1Q9HAE3 211 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 FBXO6Q9NRD1 293 aaPredicted RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 ZNF224Q9NZL3 707 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ARHGAP28Q9P2N2 729 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CDH22Q9UJ99 828 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 VAV3Q9UKW4 847 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 SNX6Q9UNH7 406 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PCDHGB6Q9Y5F9 930 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PCDHA3Q9Y5H8 950 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 HSPE1-MOB4S4R3N1 261 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PREX2Q70Z35 1606 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 MROH1Q8NDA8 1641 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 UNC13BO14795 1591 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CHD4Q14839 1912 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CEP170BQ9Y4F5 1589 aaPredicted RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 TMEM82A0PJX8 343 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 HACD1B0YJ81 288 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 SNAP23O00161 211 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 HUS1O60921 280 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CPNE3O75131 537 aaKnown RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 EOMESO95936 686 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 MT-CO1P00395 513 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 APOA1P02647 267 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ZBTB48P10074 688 aaPredicted RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 COX5BP10606 129 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ACADMP11310 421 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CYP2A6P11509 494 aaPredicted RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 ZNF250P15622 560 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 GJA1P17302 382 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ABCB4P21439 1286 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 FGFR2P21802 821 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 KLRC1P26715 233 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CALML3P27482 149 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ERP29P30040 261 aaKnown RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 EIF2S3P41091 472 aaKnown RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 GRIA3P42263 894 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 YAP1P46937 504 aaKnown RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 ARCN1P48444 511 aaKnown RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 SERPINB10P48595 397 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PGDP52209 483 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 HK3P52790 923 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PPP5CP53041 499 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CNTN2Q02246 1040 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CHRNDQ07001 517 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PUDPQ08623 228 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ZNF252P-AS1Q0IIN9 211 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 BTN1A1Q13410 526 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CUL2Q13617 745 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 GCKRQ14397 625 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ZNF169Q14929 603 aaPredicted RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 LLGL1Q15334 1064 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PCBP2Q15366 365 aaKnown RBP eCLIP4.14□□□□□ -1.75
CD55-208ENST00000476590 SEC23AQ15436 765 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 MAPK11Q15759 364 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PSMD5Q16401 504 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 AANATQ16613 207 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 LRRC24Q50LG9 513 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 XKR9Q5GH70 373 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 LDLRAP1Q5SW96 308 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 DESI1Q6ICB0 168 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 FAM109BQ6ICB4 259 aaPredicted RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 CASC4Q6P4E1 433 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CNSTQ6PJW8 725 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CYFIP1Q7L576 1253 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 GPR155Q7Z3F1 870 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 SLC9B2Q86UD5 537 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 TRABD2AQ86V40 505 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ADGRG3Q86Y34 549 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 IRF2BP1Q8IU81 584 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 SLC9A9Q8IVB4 645 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 GPALPP1Q8IXQ4 340 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 SMYD4Q8IYR2 804 aaPredicted RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 LNX2Q8N448 690 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 POC5Q8NA72 575 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ATG16L2Q8NAA4 619 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ZSWIM2Q8NEG5 633 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 TMIEQ8NEW7 156 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 OR7G3Q8NG95 312 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 OR4M2Q8NGB6 313 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 FBXO27Q8NI29 283 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 IFI44Q8TCB0 444 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 GRIN3AQ8TCU5 1115 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 URGCPQ8TCY9 931 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 TCEAL3Q969E4 200 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PRR11Q96HE9 360 aaPredicted RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 UBXN10Q96LJ8 280 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ZNF597Q96LX8 424 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 MAGEB10Q96LZ2 347 aaPredicted RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 FAM227BQ96M60 508 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 QKIQ96PU8 341 aaKnown RBP eCLIP4.14□□□□□ -1.75
CD55-208ENST00000476590 BCL7BQ9BQE9 202 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 TTYH2Q9BSA4 534 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 PAPOLGQ9BWT3 736 aaKnown RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 NT5C1AQ9BXI3 368 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 ANKRD60Q9BZ19 345 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 GPR61Q9BZJ8 451 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 NAA50Q9GZZ1 169 aaKnown RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 ABCG8Q9H221 673 aa4.14□□□□□ -1.75
CD55-208ENST00000476590 CDC42EP4Q9H3Q1 356 aaKnown RBP4.14□□□□□ -1.75
CD55-208ENST00000476590 POLR1BQ9H9Y6 1135 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms