RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 CCNYQ8ND76 341 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 SPPL2BQ8TCT7 592 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 NELL1Q92832 810 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 NTAN1Q96AB6 310 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 TEKT5Q96M29 485 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 RTP3Q9BQQ7 232 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 FANCFQ9NPI8 374 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 PRDM8Q9NQV8 689 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 TREX1Q9NSU2 369 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 MAGED1Q9Y5V3 778 aaPredicted RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 ANKRD36A6QL64 1941 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 RNF103-CHMP3A0A140T963 221 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 IQCA1LA6NCM1 817 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 TNFRSF10AO00220 468 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 KPNA4O00629 521 aaPredicted RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 TRIM38O00635 465 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 MUSKO15146 869 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 SLC22A2O15244 555 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 MGEA5O60502 916 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 NPR3P17342 541 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 TGM1P22735 817 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 ADSLP30566 484 aaPredicted RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 ARL4AP40617 200 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 MKI67P46013 3256 aaKnown RBP8.37□□□□□ -1.07
VAPB-205ENST00000476395 HSD17B7P56937 341 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 DGKDQ16760 1214 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 TMEM236Q5W0B7 351 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 PM20D1Q6GTS8 502 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 C11orf74Q86VG3 221 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 DLG3Q92796 817 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 ASB9Q96DX5 294 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 OSMRQ99650 979 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 OLFM1Q99784 485 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 PLXNA4Q9HCM2 1894 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 PALMDQ9NP74 551 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 SLC52A3Q9NQ40 469 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 XPR1Q9UBH6 696 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 SLC39A10Q9ULF5 831 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 ATP11BQ9Y2G3 1177 aa8.37□□□□□ -1.07
VAPB-205ENST00000476395 TTC3P53804 2025 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 PCM1Q15154 2024 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 MBLAC1A4D2B0 266 aaPredicted RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 GRXCR2A6NFK2 248 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 IGLV3-25P01717 112 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 IL7RP16871 459 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 CXCR2P25025 360 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 HCAR3P49019 387 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 DAOAP59103 153 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 CTBP1Q13363 440 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 LAMC2Q13753 1193 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 RALGPS2Q86X27 583 aaPredicted RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 SPPL2CQ8IUH8 684 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 FUNDC1Q8IVP5 155 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 KIAA2013Q8IYS2 634 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 APPL2Q8NEU8 664 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 DUS3LQ96G46 650 aaKnown RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 BEGAINQ9BUH8 593 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 ILKAPQ9H0C8 392 aaPredicted RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 FAM96AQ9H5X1 160 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 IFT80Q9P2H3 777 aaPredicted RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 CNOT11Q9UKZ1 510 aaKnown RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 PLXNA3P51805 1871 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 TRIM64A6NGJ6 449 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 FAM155AB1AL88 458 aaPredicted RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 SPNP16150 400 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 CHRM3P20309 590 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 MYF6P23409 242 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 FSHRP23945 695 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 ACADSBP45954 432 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 CENPAP49450 140 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 SUZ12Q15022 739 aaKnown RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 PYCR3Q53H96 274 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 CATSPEREQ5SY80 951 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 SEL1L3Q68CR1 1132 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 XAF1Q6GPH4 301 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 PPP4R4Q6NUP7 873 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 ESRP1Q6NXG1 681 aaKnown RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 TBPL2Q6SJ96 375 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 SLC22A15Q8IZD6 547 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 OR13F1Q8NGS4 319 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 SH3KBP1Q96B97 665 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 CLSTN3Q9BQT9 956 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 RHOJQ9H4E5 214 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 POLR3BQ9NW08 1133 aaPredicted RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 WARS2Q9UGM6 360 aaKnown RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 MRPL42Q9Y6G3 142 aaKnown RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 TCRBV3S1A0A5B6 114 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 ZBBXA8MT70 800 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 CABYRO75952 493 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 LRIG2O94898 1065 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 KRT75O95678 551 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 PEX11BO96011 259 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 DARSP14868 501 aaKnown RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 EEF1DP29692 281 aaKnown RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 SLC1A2P43004 574 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 CHRNA4P43681 627 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 SEPHS1P49903 392 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 SLC7A2P52569 658 aa8.36□□□□□ -1.07
VAPB-205ENST00000476395 IFRD2Q12894 506 aaPredicted RBP8.36□□□□□ -1.07
VAPB-205ENST00000476395 PLEKHG6Q3KR16 790 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms