RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 IKBKEQ14164 716 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 PTPRNQ16849 979 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 ZNF423Q2M1K9 1284 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 PIGGQ5H8A4 983 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 ATXN7L2Q5T6C5 722 aaPredicted RBP16.58■□□□□ 0.24
TVP23B-202ENST00000476139 FBXL19Q6PCT2 694 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 BNC2Q6ZN30 1099 aaPredicted RBP16.58■□□□□ 0.24
TVP23B-202ENST00000476139 NR1H4Q96RI1 486 aaPredicted RBP16.58■□□□□ 0.24
TVP23B-202ENST00000476139 KCNA7Q96RP8 456 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 ATOH8Q96SQ7 321 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 GPR21Q99679 349 aa16.58■□□□□ 0.24
TVP23B-202ENST00000476139 NCF1BA6NI72 391 aaPredicted RBP16.57■□□□□ 0.24
TVP23B-202ENST00000476139 NCF1CA8MVU1 366 aaPredicted RBP16.57■□□□□ 0.24
TVP23B-202ENST00000476139 SLC22A2O15244 555 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 NCF1P14598 390 aaPredicted RBP16.57■□□□□ 0.24
TVP23B-202ENST00000476139 GALNT1Q10472 559 aaPredicted RBP16.57■□□□□ 0.24
TVP23B-202ENST00000476139 SLC39A5Q6ZMH5 540 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 FEM1AQ9BSK4 669 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 ARIH1Q9Y4X5 557 aaPredicted RBP16.57■□□□□ 0.24
TVP23B-202ENST00000476139 CDC7O00311 574 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 GPC4O75487 556 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 GFAPP14136 432 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 ETS2P15036 469 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 RFTN1Q14699 578 aaPredicted RBP16.57■□□□□ 0.24
TVP23B-202ENST00000476139 TSNQ15631 228 aaKnown RBP16.57■□□□□ 0.24
TVP23B-202ENST00000476139 GSTA3Q16772 222 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 LAYNQ6UX15 382 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 CHST9Q7L1S5 443 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 BHLHE22Q8NFJ8 381 aaPredicted RBP16.57■□□□□ 0.24
TVP23B-202ENST00000476139 ADAMTS19Q8TE59 1207 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 TRPC4APQ8TEL6 797 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 JADE3Q92613 823 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 EID2BQ96D98 161 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 TMEM169Q96HH4 297 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 ZNF334Q9HCZ1 680 aaPredicted RBP16.57■□□□□ 0.24
TVP23B-202ENST00000476139 MID1IP1Q9NPA3 183 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 TAS2R13Q9NYV9 303 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 VPS28Q9UK41 221 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 PCDHB9Q9Y5E1 797 aa16.57■□□□□ 0.24
TVP23B-202ENST00000476139 SNUPNO95149 360 aaKnown RBP16.56■□□□□ 0.24
TVP23B-202ENST00000476139 UQCRBP14927 111 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 LPOP22079 712 aaPredicted RBP16.56■□□□□ 0.24
TVP23B-202ENST00000476139 MC4RP32245 332 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 GEN1Q17RS7 908 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 AGKQ53H12 422 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 LARP4Q71RC2 724 aaKnown RBP eCLIP16.56■□□□□ 0.24
TVP23B-202ENST00000476139 ADGRG6Q86SQ4 1221 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 PGAM4Q8N0Y7 254 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 STON2Q8WXE9 905 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 ESAMQ96AP7 390 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 INTS10Q9NVR2 710 aaKnown RBP16.56■□□□□ 0.24
TVP23B-202ENST00000476139 PLK2Q9NYY3 685 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 ADA2Q9NZK5 511 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 IQCF5A8MTL0 148 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 FBP2O00757 339 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 NIPSNAP2O75323 286 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 NME5P56597 212 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 SATB1Q01826 763 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 FOLH1Q04609 750 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 SLC30A9Q6PML9 568 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 AFTPHQ6ULP2 937 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 GALNT4Q8N4A0 578 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 SIDT2Q8NBJ9 832 aaKnown RBP16.56■□□□□ 0.24
TVP23B-202ENST00000476139 FAR2Q96K12 515 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 CEP295NLQ96MC4 621 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 TM6SF2Q9BZW4 377 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 CCDC68Q9H2F9 335 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 RIMKLBQ9ULI2 386 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 PRPF19Q9UMS4 504 aaKnown RBP16.56■□□□□ 0.24
TVP23B-202ENST00000476139 DTNAQ9Y4J8 743 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 PSMD12O00232 456 aaPredicted RBP16.56■□□□□ 0.24
TVP23B-202ENST00000476139 CTPS1P17812 591 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 DEFB103AP81534 67 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 NFKB2Q00653 900 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 ECT2LQ008S8 904 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 FASTKQ14296 549 aaKnown RBP16.56■□□□□ 0.24
TVP23B-202ENST00000476139 GK3PQ14409 553 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 ZRANB3Q5FWF4 1079 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 ANKRD33Q7Z3H0 272 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 C19orf60Q96EN9 201 aa16.56■□□□□ 0.24
TVP23B-202ENST00000476139 PDE4DIPQ5VU43 2346 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 GREM1O60565 184 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 CLASP2O75122 1294 aaKnown RBP16.55■□□□□ 0.24
TVP23B-202ENST00000476139 ALPIP09923 528 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 ALDOCP09972 364 aaKnown RBP16.55■□□□□ 0.24
TVP23B-202ENST00000476139 HSPA1AP0DMV8 641 aaKnown RBP16.55■□□□□ 0.24
TVP23B-202ENST00000476139 HSPA1BP0DMV9 641 aaKnown RBP16.55■□□□□ 0.24
TVP23B-202ENST00000476139 HERC3Q15034 1050 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 TPGS2Q68CL5 300 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 NCEH1Q6PIU2 408 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 PAOXQ6QHF9 649 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 PQLC1Q8N2U9 271 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 ICA1LQ8NDH6 482 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 CCDC97Q96F63 343 aaPredicted RBP16.55■□□□□ 0.24
TVP23B-202ENST00000476139 SERPINI1Q99574 410 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 TRMOQ9BU70 441 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 ADGRE3Q9BY15 652 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 MRPL1Q9BYD6 325 aaKnown RBP16.55■□□□□ 0.24
TVP23B-202ENST00000476139 PCDHAC1Q9H158 963 aa16.55■□□□□ 0.24
TVP23B-202ENST00000476139 AKTIPQ9H8T0 292 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms