RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 CNTN4Q8IWV2 1026 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 DCLK2Q8N568 766 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 SGSM3Q96HU1 749 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 MCMBPQ9BTE3 642 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 TRABDQ9H4I3 376 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 CCDC134Q9H6E4 229 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 CD248Q9HCU0 757 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 MUTYHQ9UIF7 546 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 FBXL21Q9UKT6 434 aa18.02■□□□□ 0.47
ATG4B-217ENST00000475693 DNAJC6O75061 913 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 DNAJC8O75937 253 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-217ENST00000475693 S1PR4O95977 384 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 ALDOAP04075 364 aaKnown RBP18.01■□□□□ 0.47
ATG4B-217ENST00000475693 PYGBP11216 843 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 CHRNB1P11230 501 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 GM2AP17900 193 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 VIPR1P32241 457 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 MMP12P39900 470 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 GAS6Q14393 721 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 ERN2Q76MJ5 926 aaKnown RBP18.01■□□□□ 0.47
ATG4B-217ENST00000475693 HDDC3Q8N4P3 179 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 CCT6BQ92526 530 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 VPS39Q96JC1 886 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 LMAN1LQ9HAT1 526 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 DYRK4Q9NR20 520 aa18.01■□□□□ 0.47
ATG4B-217ENST00000475693 NEMP1O14524 444 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 RFPL1O75677 317 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 RNASEH2AO75792 299 aaKnown RBP18■□□□□ 0.47
ATG4B-217ENST00000475693 PRAMEF1O95521 474 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 SNRPAP09012 282 aaKnown RBP18■□□□□ 0.47
ATG4B-217ENST00000475693 TAS2R38P59533 333 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 PIP5KL1Q5T9C9 394 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 WLSQ5T9L3 541 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 LIPIQ6XZB0 460 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 ZNF852Q6ZMS4 543 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 CPLX4Q7Z7G2 160 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 FAM124AQ86V42 546 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 SLC41A1Q8IVJ1 513 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 NDUFAF2Q8N183 169 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 GPATCH11Q8N954 259 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 GANCQ8TET4 914 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 SPOCK2Q92563 424 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 FUBP1Q96AE4 644 aaKnown RBP18■□□□□ 0.47
ATG4B-217ENST00000475693 SELENOSQ9BQE4 189 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 ZNF180Q9UJW8 692 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 SLC39A10Q9ULF5 831 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 IQANK1A0A1B0GTG1 560 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 C1QTNF3-AMACRE9PGA6 284 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 TPP1O14773 563 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 SRP72O76094 671 aaKnown RBP18■□□□□ 0.47
ATG4B-217ENST00000475693 MT-ND3P03897 115 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 GSTA1P08263 222 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 SPINT3P49223 89 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 FASTKD1Q53R41 847 aaKnown RBP18■□□□□ 0.47
ATG4B-217ENST00000475693 ZNF687Q8N1G0 1237 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 OR2T3Q8NH03 318 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 BOCQ9BWV1 1114 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 SLC13A1Q9BZW2 595 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 UNKQ9C0B0 810 aaKnown RBP18■□□□□ 0.47
ATG4B-217ENST00000475693 ASB8Q9H765 288 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 KCNK9Q9NPC2 374 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 DMDP11532 3685 aa18■□□□□ 0.47
ATG4B-217ENST00000475693 BRAFP15056 766 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 GLULP15104 373 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 SCTRP47872 440 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 STC1P52823 247 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 PDE1BQ01064 536 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 FZD5Q13467 585 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 LAMB3Q13751 1172 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 ITIH4Q14624 930 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 STARD3Q14849 445 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 ACOX1Q15067 660 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 GRTP1Q5TC63 336 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 AGBL4Q5VU57 503 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 DPPA4Q7L190 304 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 DSG4Q86SJ6 1040 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 RIBC1Q8N443 379 aaPredicted RBP17.99■□□□□ 0.47
ATG4B-217ENST00000475693 MGARPQ8TDB4 240 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 KLK6Q92876 244 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 ZNF317Q96PQ6 595 aaPredicted RBP17.99■□□□□ 0.47
ATG4B-217ENST00000475693 FAM167BQ9BTA0 163 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 RIMKLBQ9ULI2 386 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 VPS13AQ96RL7 3174 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 SCN8AQ9UQD0 1980 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 GLYATL1P3A0A0U1RQE8 302 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 FAM47DPA6NHR8 397 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 AREL1O15033 823 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 PHGDHO43175 533 aaKnown RBP17.99■□□□□ 0.47
ATG4B-217ENST00000475693 KRT37O76014 449 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 KRT38O76015 456 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 ELFN1P0C7U0 828 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 PSMA3P25788 255 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 PMLP29590 882 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 HADHAP40939 763 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 NEK3P51956 506 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 LIMK2P53671 638 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 SNCBQ16143 134 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 ATP13A5Q4VNC0 1218 aa17.99■□□□□ 0.47
ATG4B-217ENST00000475693 ZNF648Q5T619 568 aaPredicted RBP17.99■□□□□ 0.47
ATG4B-217ENST00000475693 ERAP2Q6P179 960 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms