RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 NLGN4XQ8N0W4 816 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 ATPAF2Q8N5M1 289 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 TEX26Q8N6G2 289 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 NLGN4YQ8NFZ3 816 aaPredicted RBP17.72■□□□□ 0.43
PCGF3-209ENST00000475288 RTP4Q96DX8 246 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 TRIM11Q96F44 468 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 AHCYL2Q96HN2 611 aaKnown RBP17.72■□□□□ 0.43
PCGF3-209ENST00000475288 CSPG4P5Q96PW8 444 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 SLC38A3Q99624 504 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 HSD3B7Q9H2F3 369 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 TRIT1Q9H3H1 467 aaKnown RBP17.72■□□□□ 0.43
PCGF3-209ENST00000475288 EPB41L1Q9H4G0 881 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 MRPL47Q9HD33 250 aaKnown RBP17.72■□□□□ 0.43
PCGF3-209ENST00000475288 SARS2Q9NP81 518 aaKnown RBP17.72■□□□□ 0.43
PCGF3-209ENST00000475288 ETNK2Q9NVF9 386 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 GOLGA6AQ9NYA3 693 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 PLEKHM1Q9Y4G2 1056 aa17.72■□□□□ 0.43
PCGF3-209ENST00000475288 TMEM184BQ9Y519 407 aaPredicted RBP17.72■□□□□ 0.43
PCGF3-209ENST00000475288 CLEC18AA5D8T8 446 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 FTLP02792 175 aaPredicted RBP17.71■□□□□ 0.43
PCGF3-209ENST00000475288 MYBL1P10243 752 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 CES1P23141 567 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 IL1R2P27930 398 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 PRKCIP41743 596 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 EPHA4P54764 986 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 MAXP61244 160 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 PTSQ03393 145 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 ABHD18Q0P651 414 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 LRRC66Q68CR7 880 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 DOK6Q6PKX4 331 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 CLEC18BQ6UXF7 455 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 CEACAM20Q6UY09 585 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 FAM129CQ86XR2 697 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 CLEC18CQ8NCF0 446 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 EXD1Q8NHP7 514 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 TEKT4Q8WW24 435 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 KIAA1143Q96AT1 154 aaPredicted RBP17.71■□□□□ 0.43
PCGF3-209ENST00000475288 SH3KBP1Q96B97 665 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 EPN3Q9H201 632 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 GPN2Q9H9Y4 310 aaPredicted RBP17.71■□□□□ 0.43
PCGF3-209ENST00000475288 VPS18Q9P253 973 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 CNOT8Q9UFF9 292 aaKnown RBP17.71■□□□□ 0.43
PCGF3-209ENST00000475288 TMEM98Q9Y2Y6 226 aa17.71■□□□□ 0.43
PCGF3-209ENST00000475288 A0A0J9YYE9 177 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 TRBC1P01850 177 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 AMPD1P23109 780 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 MPSTP25325 297 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 STC1P52823 247 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 FOXK1P85037 733 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 MAP7Q14244 749 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 NCAPHQ15003 741 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 AVL9Q8NBF6 648 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 C9orf43Q8TAL5 461 aaPredicted RBP17.7■□□□□ 0.42
PCGF3-209ENST00000475288 STN1Q9H668 368 aaKnown RBP17.7■□□□□ 0.42
PCGF3-209ENST00000475288 RMI1Q9H9A7 625 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.7■□□□□ 0.42
PCGF3-209ENST00000475288 LMBRD1Q9NUN5 540 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 AIPL1Q9NZN9 384 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 ANKMY1Q9P2S6 941 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 AMACRQ9UHK6 382 aa17.7■□□□□ 0.42
PCGF3-209ENST00000475288 LRRK2Q5S007 2527 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 LRRC53A6NM62 1247 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 DNAJC6O75061 913 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 NTRK1P04629 796 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 PDHA1P08559 390 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 SLC2A4P14672 509 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 CTPS1P17812 591 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 RPL26P61254 145 aaKnown RBP17.69■□□□□ 0.42
PCGF3-209ENST00000475288 MC1RQ01726 317 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 HHEXQ03014 270 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 CDC20Q12834 499 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 UBAP2LQ14157 1087 aaKnown RBP17.69■□□□□ 0.42
PCGF3-209ENST00000475288 PTPRRQ15256 657 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 STX1AQ16623 288 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 SASS6Q6UVJ0 657 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 RFLNAQ6ZTI6 216 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 ZNF571Q7Z3V5 609 aaPredicted RBP17.69■□□□□ 0.42
PCGF3-209ENST00000475288 PTRH1Q86Y79 214 aaKnown RBP17.69■□□□□ 0.42
PCGF3-209ENST00000475288 SCAMP4Q969E2 229 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 FATE1Q969F0 183 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 ZNF653Q96CK0 615 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 LYSMD1Q96S90 227 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 HERPUD2Q9BSE4 406 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 POLR1EQ9GZS1 481 aaKnown RBP17.69■□□□□ 0.42
PCGF3-209ENST00000475288 ZMYND15Q9H091 742 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 ISCUQ9H1K1 167 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 HAUS4Q9H6D7 363 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 RCOR3Q9P2K3 495 aaPredicted RBP17.69■□□□□ 0.42
PCGF3-209ENST00000475288 CD84Q9UIB8 345 aa17.69■□□□□ 0.42
PCGF3-209ENST00000475288 RPL26L1Q9UNX3 145 aaKnown RBP17.69■□□□□ 0.42
PCGF3-209ENST00000475288 A6NCN8 305 aa17.68■□□□□ 0.42
PCGF3-209ENST00000475288 DDX3XO00571 662 aaKnown RBP eCLIP17.68■□□□□ 0.424e-6■■■□□ 16.6
PCGF3-209ENST00000475288 MAP3K6O95382 1288 aa17.68■□□□□ 0.42
PCGF3-209ENST00000475288 ANKRD34CP0C6C1 535 aa17.68■□□□□ 0.42
PCGF3-209ENST00000475288 RARAP10276 462 aa17.68■□□□□ 0.42
PCGF3-209ENST00000475288 PIGHQ14442 188 aaPredicted RBP17.68■□□□□ 0.42
PCGF3-209ENST00000475288 ASIC2Q16515 512 aa17.68■□□□□ 0.42
PCGF3-209ENST00000475288 SKIDA1Q1XH10 827 aa17.68■□□□□ 0.42
PCGF3-209ENST00000475288 SMTNL2Q2TAL5 461 aa17.68■□□□□ 0.42
PCGF3-209ENST00000475288 IYDQ6PHW0 289 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms