RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 LPOP22079 712 aaPredicted RBP16.84■□□□□ 0.29
SCAF11-206ENST00000474828 IVDP26440 423 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 HTR1BP28222 390 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 GRIA1P42261 906 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 PAFAH1B1P43034 410 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 HNRNPKP61978 463 aaKnown RBP eCLIP16.84■□□□□ 0.29
SCAF11-206ENST00000474828 PUM1Q14671 1186 aaKnown RBP eCLIP16.84■□□□□ 0.292e-8■■■■□ 19.4
SCAF11-206ENST00000474828 ALG11Q2TAA5 492 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 PRAMEF14Q5SWL7 426 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 SYDE1Q6ZW31 735 aaPredicted RBP16.84■□□□□ 0.29
SCAF11-206ENST00000474828 ZNF534Q76KX8 674 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 SLC25A45Q8N413 288 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 BLOC1S5Q8TDH9 187 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 BTN2A2Q8WVV5 523 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 PEX13Q92968 403 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 CAPZA3Q96KX2 299 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 DDX47Q9H0S4 455 aaKnown RBP16.84■□□□□ 0.29
SCAF11-206ENST00000474828 PHPT1Q9NRX4 125 aaPredicted RBP16.84■□□□□ 0.29
SCAF11-206ENST00000474828 SMOXQ9NWM0 555 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 TMPRSS11EQ9UL52 423 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 ARL5AQ9Y689 179 aa16.84■□□□□ 0.29
SCAF11-206ENST00000474828 ZNF106Q9H2Y7 1883 aaKnown RBP16.84■□□□□ 0.29
SCAF11-206ENST00000474828 C2orf81A6NN90 581 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 KIF2AO00139 706 aaPredicted RBP16.83■□□□□ 0.28
SCAF11-206ENST00000474828 AP3B1O00203 1094 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 FLRT2O43155 660 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 LRP4O75096 1905 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 PIAS2O75928 621 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 ECEL1O95672 775 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 GAS8O95995 478 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 FUCA1P04066 466 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 COL5A1P20908 1838 aaPredicted RBP16.83■□□□□ 0.28
SCAF11-206ENST00000474828 DGKAP23743 735 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 GPR1P46091 355 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 HK3P52790 923 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 XIAPP98170 497 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 ACVR1Q04771 509 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 PTK6Q13882 451 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 SUZ12Q15022 739 aaKnown RBP16.83■□□□□ 0.28
SCAF11-206ENST00000474828 KCTD16Q68DU8 428 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 RAET1GQ6H3X3 334 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 SDR16C5Q8N3Y7 309 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 MCUQ8NE86 351 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 OR56A4Q8NGH8 313 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 OR52K1Q8NGK4 314 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 CPT1BQ92523 772 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 TRIM44Q96DX7 344 aaPredicted RBP16.83■□□□□ 0.28
SCAF11-206ENST00000474828 HIC2Q96JB3 615 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 FGF22Q9HCT0 170 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 VPS18Q9P253 973 aa16.83■□□□□ 0.28
SCAF11-206ENST00000474828 CDV3Q9UKY7 258 aaKnown RBP16.83■□□□□ 0.28
SCAF11-206ENST00000474828 GPR89AB7ZAQ6 455 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 E7EVH7 732 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 IVLP07476 585 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 GPR89BP0CG08 455 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 MLNP12872 115 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 SPAM1P38567 509 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 BLKP51451 505 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 SRP54P61011 504 aaKnown RBP16.82■□□□□ 0.28
SCAF11-206ENST00000474828 BNIP3Q12983 259 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 GPS1Q13098 491 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 CBLBQ13191 982 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 LRRC8BQ6P9F7 803 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 GLRX5Q86SX6 157 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 PHACTR4Q8IZ21 702 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 SPATA4Q8NEY3 305 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 OR1E3Q8WZA6 343 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 C16orf45Q96MC5 204 aaPredicted RBP16.82■□□□□ 0.28
SCAF11-206ENST00000474828 NLE1Q9NVX2 485 aaPredicted RBP16.82■□□□□ 0.28
SCAF11-206ENST00000474828 PCOLCE2Q9UKZ9 415 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 PKP3Q9Y446 797 aa16.82■□□□□ 0.28
SCAF11-206ENST00000474828 ASCC3Q8N3C0 2202 aaKnown RBP16.82■□□□□ 0.28
SCAF11-206ENST00000474828 CABIN1Q9Y6J0 2220 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 TCRBV7S3A2A0A539 114 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 GOLGA8CPA6NN73 597 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 TPP1O14773 563 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 STX7O15400 261 aaKnown RBP16.81■□□□□ 0.28
SCAF11-206ENST00000474828 RASGRP1O95267 797 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 JUNDP17535 347 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 HADHAP40939 763 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 GRK6P43250 576 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 MAGEA3P43357 314 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 PPARDQ03181 441 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 LAMB3Q13751 1172 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 DHX34Q14147 1143 aaKnown RBP16.81■□□□□ 0.28
SCAF11-206ENST00000474828 NAXDQ8IW45 347 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 TAB3Q8N5C8 712 aaPredicted RBP16.81■□□□□ 0.28
SCAF11-206ENST00000474828 NAT8LQ8N9F0 302 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 ZNF548Q8NEK5 533 aaPredicted RBP16.81■□□□□ 0.28
SCAF11-206ENST00000474828 OR4K2Q8NGD2 314 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 STYXQ8WUJ0 223 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 GLYATL1Q969I3 302 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 SGSM3Q96HU1 749 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 RMI1Q9H9A7 625 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 DNAJC28Q9NX36 388 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 CDC23Q9UJX2 597 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 APPL1Q9UKG1 709 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 KCTD3Q9Y597 815 aa16.81■□□□□ 0.28
SCAF11-206ENST00000474828 TRBV5-4A0A0C4DH59 114 aa16.8■□□□□ 0.28
SCAF11-206ENST00000474828 MED19A0JLT2 244 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms