RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 FASLGP48023 281 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 HHEXQ03014 270 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 DPTQ07507 201 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 ITKQ08881 620 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 NFATC2Q13469 925 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 PYCR3Q53H96 274 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 PPP1R2P3Q6NXS1 205 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 C16orf46Q6P387 395 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 CEACAM20Q6UY09 585 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCDC78-209ENST00000474647 BMPERQ8N8U9 685 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 SPOCK2Q92563 424 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 HSPH1Q92598 858 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 SCAMP4Q969E2 229 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 SCRN2Q96FV2 425 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 SLC45A3Q96JT2 553 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 TEFMQ96QE5 360 aaKnown RBP13.91□□□□□ -0.18
CCDC78-209ENST00000474647 SMIM14Q96QK8 99 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 ABCG8Q9H221 673 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 STN1Q9H668 368 aaKnown RBP13.91□□□□□ -0.18
CCDC78-209ENST00000474647 ETNK2Q9NVF9 386 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 LIMA1Q9UHB6 759 aaKnown RBP13.91□□□□□ -0.18
CCDC78-209ENST00000474647 ANAPC2Q9UJX6 822 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 TEX15Q9BXT5 2789 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 SYCE3A1L190 88 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 TMEM191CA6NGB0 347 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 EML2O95834 649 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 PEX11BO96011 259 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 MAP4P27816 1152 aaKnown RBP13.9□□□□□ -0.18
CCDC78-209ENST00000474647 OAS2P29728 719 aaKnown RBP13.9□□□□□ -0.18
CCDC78-209ENST00000474647 NOP2P46087 812 aaKnown RBP13.9□□□□□ -0.18
CCDC78-209ENST00000474647 HCAR3P49019 387 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 ZNF135P52742 658 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-209ENST00000474647 EPHB1P54762 984 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 FOXK1P85037 733 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 SQSTM1Q13501 440 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 DEFB109BQ30KR1 87 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 MARC1Q5VT66 337 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 ADAMTSL4Q6UY14 1074 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 CHST15Q7LFX5 561 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-209ENST00000474647 TECPR1Q7Z6L1 1165 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 PSTKQ8IV42 348 aaKnown RBP13.9□□□□□ -0.18
CCDC78-209ENST00000474647 NDUFAF2Q8N183 169 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 CBARPQ8N350 705 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-209ENST00000474647 SFRP1Q8N474 314 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 STARD8Q92502 1023 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 NCSTNQ92542 709 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 ZNF653Q96CK0 615 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 RNF31Q96EP0 1072 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 ERGIC2Q96RQ1 377 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 MCCC1Q96RQ3 725 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-209ENST00000474647 AGAP2Q99490 1192 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 APMAPQ9HDC9 416 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 NT5MQ9NPB1 228 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.9□□□□□ -0.18
CCDC78-209ENST00000474647 MYO1AQ9UBC5 1043 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 CNOT8Q9UFF9 292 aaKnown RBP13.9□□□□□ -0.18
CCDC78-209ENST00000474647 ZNHIT2Q9UHR6 403 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 PRKAB1Q9Y478 270 aa13.9□□□□□ -0.18
CCDC78-209ENST00000474647 MAFKO60675 156 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 STK17BO94768 372 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 ATP1A1P05023 1023 aaKnown RBP13.89□□□□□ -0.19
CCDC78-209ENST00000474647 PDHA1P08559 390 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 CDH6P55285 790 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 MC2RQ01718 297 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 MYL5Q02045 173 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 LRP8Q14114 963 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 NCAPHQ15003 741 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 STX1AQ16623 288 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 ATP1A1-AS1Q5TC04 95 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 SASS6Q6UVJ0 657 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 TIPARPQ7Z3E1 657 aaKnown RBP13.89□□□□□ -0.19
CCDC78-209ENST00000474647 IRF2BP2Q7Z5L9 587 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 SCARF2Q96GP6 870 aaPredicted RBP13.89□□□□□ -0.19
CCDC78-209ENST00000474647 ABHD17AQ96GS6 310 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 EFHD1Q9BUP0 239 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 KCNK6Q9Y257 313 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 TTLL3Q9Y4R7 772 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 SCINQ9Y6U3 715 aa13.89□□□□□ -0.19
CCDC78-209ENST00000474647 USP9YO00507 2555 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-209ENST00000474647 PRRC2CQ9Y520 2896 aaKnown RBP13.88□□□□□ -0.19
CCDC78-209ENST00000474647 SNX2O60749 519 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 PYGLP06737 847 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 ACP5P13686 325 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 TCF4P15884 667 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 TCN2P20062 427 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 SERPINB6P35237 376 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 TYRO3Q06418 890 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 ABHD18Q0P651 414 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 SEPT6Q14141 434 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 ASIC2Q16515 512 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 DPYSL2Q16555 572 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 LACTB2Q53H82 288 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-209ENST00000474647 RALGPS1Q5JS13 557 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-209ENST00000474647 WDR74Q6RFH5 385 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-209ENST00000474647 EXD1Q8NHP7 514 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 APOBEC4Q8WW27 367 aaKnown RBP13.88□□□□□ -0.19
CCDC78-209ENST00000474647 PIH1D2Q8WWB5 315 aa13.88□□□□□ -0.19
CCDC78-209ENST00000474647 CSPG4P5Q96PW8 444 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms