RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 SEMA3AQ14563 771 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 INPP5AQ14642 412 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 LRRC14Q15048 493 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 CHRNA6Q15825 494 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 ANKRD20A4Q4UJ75 823 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 ATP13A5Q4VNC0 1218 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 HP1BP3Q5SSJ5 553 aaPredicted RBP10.31□□□□□ -0.76
CASC3-204ENST00000474190 TEX35Q5T0J7 233 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 LYSMD4Q5XG99 296 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 TRMT10BQ6PF06 316 aaKnown RBP10.31□□□□□ -0.76
CASC3-204ENST00000474190 ADAMTSL4Q6UY14 1074 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 UNC5AQ6ZN44 842 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 C11orf74Q86VG3 221 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 RELL1Q8IUW5 271 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 GSPT2Q8IYD1 628 aaKnown RBP10.31□□□□□ -0.76
CASC3-204ENST00000474190 OR13H1Q8NG92 308 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 STYXQ8WUJ0 223 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 FOXJ1Q92949 421 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 PEX13Q92968 403 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 NUS1Q96E22 293 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 SGSM3Q96HU1 749 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 CNTNAP3BQ96NU0 1288 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 PLEKHG4BQ96PX9 1271 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 SRPK1Q96SB4 655 aaKnown RBP10.31□□□□□ -0.76
CASC3-204ENST00000474190 MYOCQ99972 504 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 CNTNAP3Q9BZ76 1288 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 PHACTR1Q9C0D0 580 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 EPB41L4BQ9H329 900 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 SMOC1Q9H4F8 434 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 FAM83DQ9H4H8 585 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 UGT1A7Q9HAW7 530 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 UGT1A10Q9HAW8 530 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 UGT1A8Q9HAW9 530 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 CAPN10Q9HC96 672 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 IL1RAPL1Q9NZN1 696 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 MARCH4Q9P2E8 410 aaPredicted RBP10.31□□□□□ -0.76
CASC3-204ENST00000474190 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.31□□□□□ -0.76
CASC3-204ENST00000474190 KLF15Q9UIH9 416 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 SMG5Q9UPR3 1016 aaKnown RBP10.31□□□□□ -0.76
CASC3-204ENST00000474190 DMTF1Q9Y222 760 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 FNDC3AQ9Y2H6 1198 aaKnown RBP10.31□□□□□ -0.76
CASC3-204ENST00000474190 HS3ST3A1Q9Y663 406 aa10.31□□□□□ -0.76
CASC3-204ENST00000474190 OAS3Q9Y6K5 1087 aaKnown RBP10.31□□□□□ -0.76
CASC3-204ENST00000474190 V9GYY5 206 aaPredicted RBP10.31□□□□□ -0.76
CASC3-204ENST00000474190 C2orf81A6NN90 581 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 PATE3B3GLJ2 98 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 PRAMEF26H0Y7S4 382 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 MAP3K13O43283 966 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 LZTS3O60299 673 aaPredicted RBP10.3□□□□□ -0.76
CASC3-204ENST00000474190 CRTAMO95727 393 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 PCCBP05166 539 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 HOXC4P09017 264 aaPredicted RBP10.3□□□□□ -0.76
CASC3-204ENST00000474190 DHPSP49366 369 aaPredicted RBP10.3□□□□□ -0.76
CASC3-204ENST00000474190 VSNL1P62760 191 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 RACK1P63244 317 aaKnown RBP10.3□□□□□ -0.76
CASC3-204ENST00000474190 SEPT6Q14141 434 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 SHBQ15464 509 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 HIF1AQ16665 826 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 ERCC6LQ2NKX8 1250 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 BBS9Q3SYG4 887 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 SETMARQ53H47 684 aaPredicted RBP10.3□□□□□ -0.76
CASC3-204ENST00000474190 ZNF648Q5T619 568 aaPredicted RBP10.3□□□□□ -0.76
CASC3-204ENST00000474190 ARMC3Q5W041 872 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 ALS2CLQ60I27 953 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 CCDC70Q6NSX1 233 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 PSAPL1Q6NUJ1 521 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 KYAT3Q6YP21 454 aaKnown RBP10.3□□□□□ -0.76
CASC3-204ENST00000474190 DGLUCYQ7Z3D6 616 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 TRIM74Q86UV6 250 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 SPNS2Q8IVW8 549 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 NDUFAF2Q8N183 169 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 TRAM1L1Q8N609 369 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 BBOF1Q8ND07 529 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 NAT14Q8WUY8 206 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 HDAC10Q969S8 669 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 AP2M1Q96CW1 435 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 SCARF2Q96GP6 870 aaPredicted RBP10.3□□□□□ -0.76
CASC3-204ENST00000474190 LOXL4Q96JB6 756 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 SERAC1Q96JX3 654 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 MCMBPQ9BTE3 642 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 FRMD8Q9BZ67 464 aaPredicted RBP10.3□□□□□ -0.76
CASC3-204ENST00000474190 FSCN3Q9NQT6 498 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 SMYD2Q9NRG4 433 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 FAM114A2Q9NRY5 505 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 SMOXQ9NWM0 555 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 MOCS1Q9NZB8 636 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 BFARQ9NZS9 450 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 NFU1Q9UMS0 254 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 OR1A2Q9Y585 309 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 ST14Q9Y5Y6 855 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 ANKRD36A6QL64 1941 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 CHD6Q8TD26 2715 aa10.3□□□□□ -0.76
CASC3-204ENST00000474190 DOCK9Q9BZ29 2069 aa10.29□□□□□ -0.76
CASC3-204ENST00000474190 IGLV3-16A0A075B6K0 115 aa10.29□□□□□ -0.76
CASC3-204ENST00000474190 TMEM202A6NGA9 273 aa10.29□□□□□ -0.76
CASC3-204ENST00000474190 PRR19A6NJB7 356 aa10.29□□□□□ -0.76
CASC3-204ENST00000474190 AP3B1O00203 1094 aa10.29□□□□□ -0.76
CASC3-204ENST00000474190 STX7O15400 261 aaKnown RBP10.29□□□□□ -0.76
CASC3-204ENST00000474190 SRP72O76094 671 aaKnown RBP10.29□□□□□ -0.76
CASC3-204ENST00000474190 USP1O94782 785 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms