RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 LIMK2P53671 638 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 MAGOHP61326 146 aaKnown RBP10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 RPS21P63220 83 aaKnown RBP10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 DNAJC3Q13217 504 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 MSLNQ13421 630 aaPredicted RBP10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 NFATC2Q13469 925 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 GTF2H3Q13889 308 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 PTPRCAPQ14761 206 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TMEM52BQ4KMG9 183 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 IER5LQ5T953 404 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D3GQ6DHY5 549 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 RAET1GQ6H3X3 334 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D3CQ6IPX1 549 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 ANO7Q6IWH7 933 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 KIAA1161Q6NSJ0 714 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM45BPQ6NSW5 357 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 LIPIQ6XZB0 460 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 Q6ZS52 159 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TRIM67Q6ZTA4 783 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 GALNT7Q86SF2 657 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM124AQ86V42 546 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 PHYKPLQ8IUZ5 450 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 DENND6AQ8IWF6 608 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 TBC1D3Q8IZP1 549 aaPredicted RBP10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 RBFAQ8N0V3 343 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 PJA1Q8NG27 643 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 GPR150Q8NGU9 434 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM45AQ8TCE6 357 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 ZNF398Q8TD17 642 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 HEXDCQ8WVB3 486 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 ALKBH8Q96BT7 664 aaKnown RBP10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 AP2M1Q96CW1 435 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 SGSM3Q96HU1 749 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 SMIM14Q96QK8 99 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 SH3GL2Q99962 352 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 OSBPL6Q9BZF3 934 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 FOXQ1Q9C009 403 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 BTBD1Q9H0C5 482 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 PREBQ9HCU5 417 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 KCNK9Q9NPC2 374 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 NKIRAS1Q9NYS0 192 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 CD84Q9UIB8 345 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 GGT7Q9UJ14 662 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 GNPTGQ9UJJ9 305 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 HCN2Q9UL51 889 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 SLC39A10Q9ULF5 831 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 SIT1Q9Y3P8 196 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 COMMD10Q9Y6G5 202 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 REV3LO60673 3130 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 SCN8AQ9UQD0 1980 aa10.23□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM95CA0A1B0GW59 222 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 A0A1W2PQF6 199 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 H3BMM5 538 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 AGPSO00116 658 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 QSOX1O00391 747 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 PLK4O00444 970 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 COPEO14579 308 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 MMP20O60882 483 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 ZNF217O75362 1048 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 VPS26AO75436 327 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 APBB3O95704 486 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 BMP1P13497 986 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 STMN1P16949 149 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 NDUFV2P19404 249 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 NR1D1P20393 614 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 MSH3P20585 1137 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 OXTRP30559 389 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 ETV3P41162 512 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 PTGER3P43115 390 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 GPR1P46091 355 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 MPP1Q00013 466 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 PTSQ03393 145 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 BMPR2Q13873 1038 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 USP10Q14694 798 aaKnown RBP10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 PTPRRQ15256 657 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 CHRNA6Q15825 494 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 TJAP1Q5JTD0 557 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 PIP5KL1Q5T9C9 394 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 AGBL4Q5VU57 503 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 PTRHD1Q6GMV3 140 aaKnown RBP10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 UGT3A1Q6NUS8 523 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 ZNF765Q7L2R6 523 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 HSD11B1LQ7Z5J1 315 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 AADATQ8N5Z0 425 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 TRAM1L1Q8N609 369 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 DTD2Q96FN9 168 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 SPACA7Q96KW9 195 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 MRGPRX1Q96LB2 322 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 COPS8Q99627 209 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 DHRS4Q9BTZ2 278 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 MKRN2Q9H000 416 aaKnown RBP10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 KDM4CQ9H3R0 1056 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 FAM96AQ9H5X1 160 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 SGK2Q9HBY8 427 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 SMYD2Q9NRG4 433 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 SLC17A6Q9P2U8 582 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 SMG5Q9UPR3 1016 aaKnown RBP10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 PCDHB1Q9Y5F3 818 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 FADS3Q9Y5Q0 445 aa10.22□□□□□ -0.77
PRPF38A-202ENST00000474048 ACTL7BQ9Y614 415 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms